CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43180	Soybean	cytosol	67.11	39.69
KRH76768	Soybean	cytosol	63.82	32.44
KRH28699	Soybean	cytosol	63.82	32.44
VIT_04s0043g00820.t01	Wine grape	cytosol	51.32	26.09
VIT_04s0023g01980.t01	Wine grape	cytosol	50.66	25.75
PGSC0003DMT400009282	Potato	cytosol, mitochondrion	49.34	25.08
Solyc02g085090.1.1	Tomato	cytosol	48.68	24.75
AT2G18260.1	Thale cress	cytosol	47.37	23.61
CDY46302	Canola	cytosol	42.11	22.22
Bra039622.1-P	Field mustard	cytosol	42.11	22.22
Bra024476.1-P	Field mustard	cytosol	39.47	20.98
CDY20921	Canola	cytosol	39.47	20.98
CDY29223	Canola	cytosol	39.47	20.91
KRH70169	Soybean	cytosol	17.11	17.69
GSMUA_Achr10P...	Banana	cytosol	30.26	16.91
KRH08461	Soybean	cytosol	35.53	16.77
KRH72168	Soybean	cytosol	32.89	16.39
KRH41917	Soybean	cytosol	32.24	16.12
KRH70119	Soybean	cytosol	33.55	16.04
KRH10761	Soybean	cytosol	31.58	15.79
KRH32862	Soybean	cytosol	31.58	15.69
KRH21567	Soybean	cytosol	30.92	15.46
KRH72169	Soybean	cytosol	29.61	13.43
KRG96271	Soybean	cytosol, golgi, mitochondrion	26.32	13.29
KRH32861	Soybean	mitochondrion	28.95	13.25
KRH68016	Soybean	cytosol	24.34	12.59
KRH08507	Soybean	cytosol	25.0	12.34
KRH26811	Soybean	cytosol	21.71	10.78
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	21.71	10.78
CDY25157	Canola	cytosol	7.24	5.45

Protein Annotations

InterPro:2Fe2S_fd_BS	MapMan:35.1	EMBL:ACUP02003316	EnsemblPlantsGene:GLYMA_05G178400	GO:GO:0000149	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005886	GO:GO:0006810	GO:GO:0006886	GO:GO:0006887	GO:GO:0006906
GO:GO:0008150	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0031201	GO:GO:0048278	GO:GO:0051537	UniProt:K7KQY1	EnsemblPlants:KRH59335	ProteinID:KRH59335
ProteinID:KRH59335.1	PFAM:PF00804	ScanProsite:PS00197	PANTHER:PTHR19957	PANTHER:PTHR19957:SF123	InterPro:Syntaxin_N
UniParc:UPI00023C4137	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:36657134..36657592

Molecular Weight (calculated)

17484.6 Da

IEP (calculated)

4.640

GRAVY (calculated)

-0.519

Length

152 amino acids

Sequence
(BLAST)

001: MNDLMTKSFQ SYAELKKQAE KDNLEDSHDI EAGKLNNPTD YHNLSQFFQE VEAIKVEMEE VATLLFDLLQ LHEETKCTDS AKVLRGLRDR MVSDMVTLFC
101: KARIINSRFE VLDQSNITNH TLSESCKEGI QIDDQNVCHK SFCWPGSCGQ CW

Best Arabidopsis Sequence Match ( AT2G18260.1 )
(BLAST)

001: MNDLMTKSFL SYVELKKQAR TDMESDRDLE KGEDFNFDFS PADEENLSGF FQEIETIKTL IEEITHLLLD LQNLNEETKS THSTKILRGL RDRMESNIVT
101: ISRKANTVKT LIETLEKRNV ANRTSFKEGS CVDRTRTSIT NGVRKKLRDT MSEFHRLRER IFADYREDLK RKYFLATGEE PSNEDMEKMI SGSGSCSDLV
201: KTFEVKPEMD LKTKERHEAV NDIKRSLNRL HQVFLDMAVL VETQGDRIDD IEANVANAGS FVSGGTNSLY YANQMKKKTK SWVLWVSILG VLILLVCVIS
301: MLASR

Arabidopsis Description

SYP112SYP112 [Source:UniProtKB/TrEMBL;Acc:A0A178VPA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.