CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10761	Soybean	cytosol	88.82	88.82
KRH21567	Soybean	cytosol	88.16	88.16
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	27.96	81.73
Bra031761.1-P	Field mustard	cytosol	43.75	80.61
AT1G11250.1	Thale cress	cytosol	77.3	78.86
CDY20986	Canola	cytosol	76.64	78.19
AT1G61290.2	Thale cress	cytosol	77.63	77.89
CDY34656	Canola	cytosol	76.32	77.85
CDY34843	Canola	cytosol	76.32	77.85
VIT_12s0059g02060.t01	Wine grape	cytosol	77.96	77.7
CDY19350	Canola	cytosol	75.99	77.52
CDX97943	Canola	cytosol	75.99	77.52
Bra019872.1-P	Field mustard	cytosol	75.99	77.52
Bra016846.1-P	Field mustard	cytosol	75.99	77.52
CDY70107	Canola	cytosol	75.66	77.18
Bra031759.1-P	Field mustard	cytosol	75.66	77.18
PGSC0003DMT400035739	Potato	cytosol	77.63	76.13
Solyc12g005580.1.1	Tomato	cytosol	77.3	75.81
PGSC0003DMT400055777	Potato	cytosol	73.68	72.03
GSMUA_Achr6P04820_001	Banana	cytosol	57.89	69.29
Zm00001d046482_P001	Maize	cytosol	70.39	69.26
EER89986	Sorghum	cytosol	69.74	68.61
TraesCS6D01G169800.1	Wheat	cytosol	68.75	68.52
Zm00001d036931_P001	Maize	cytosol	69.08	67.96
TraesCS6B01G211000.1	Wheat	cytosol	68.09	67.87
GSMUA_Achr10P...	Banana	cytosol	62.17	67.74
TraesCS7B01G260100.1	Wheat	cytosol	65.79	65.36
Os02t0209900-01	Rice	cytosol	66.78	65.27
TraesCS7A01G368400.1	Wheat	cytosol	64.47	64.05
EES06503	Sorghum	cytosol	66.12	63.81
TraesCS7D01G354500.1	Wheat	cytosol	64.14	63.73
Zm00001d053607_P001	Maize	cytosol	64.47	62.62
KRH72168	Soybean	cytosol	57.57	57.38
KRH32862	Soybean	cytosol	56.58	56.21
KRH72169	Soybean	cytosol	61.84	56.12
KRH32861	Soybean	mitochondrion	60.86	55.72
TraesCS6A01G182200.1	Wheat	cytosol	68.75	55.29
KRG96271	Soybean	cytosol, golgi, mitochondrion	50.0	50.5
KRH68016	Soybean	cytosol	47.37	48.98
KRH08461	Soybean	cytosol	50.66	47.83
KRH70119	Soybean	cytosol	50.0	47.8
KRH70169	Soybean	cytosol	22.04	45.58
KRH26811	Soybean	cytosol	45.72	45.42
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	45.72	45.42
KRH08507	Soybean	cytosol	45.39	44.81
KRH28699	Soybean	cytosol	41.45	42.14
KRH76768	Soybean	cytosol	41.45	42.14
HORVU6Hr1G038490.4	Barley	nucleus	37.17	35.87
HORVU7Hr1G085550.1	Barley	cytosol	36.84	35.56
KRH59335	Soybean	cytosol	16.12	32.24
KRH43180	Soybean	cytosol	26.32	31.13

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	EntrezGene:100805869	MapMan:22.7.1.1	EMBL:ACUP02004781	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G058300	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810
GO:GO:0006886	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0048278
UniProt:I1KQP4	InterPro:IPR000727	EnsemblPlants:KRH41917	ProteinID:KRH41917	ProteinID:KRH41917.1	PFAM:PF00804
PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF198	SMART:SM00397
SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix
InterPro:T_SNARE_dom	UniParc:UPI00023C6028	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:4469043..4471017

Molecular Weight (calculated)

35002.1 Da

IEP (calculated)

7.277

GRAVY (calculated)

-0.601

Length

304 amino acids

Sequence
(BLAST)

001: MNDLFSNSFK KYSNLKQQAH LDDVEAGKET VNLDKFFEDV ENVKEEMRTV EKLHRKLQEA NEESKVVHNA KTMKELRARM DKDVEQVLKR VKVIKGKLEA
101: LERSNAANRN IPGCGPGSSA DRTRTSVVSG LGKKLKDMMD DFQGLRTRMQ MEYKETVERR YFTITGEKPD KETIENLIWS GESESFLQRA IQEQGKGQIM
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNNIESHVAH ASSFVRRGTD QLQDAREYQK SSRKWTCYAI ILGLVLLLVL LFPILINLLP
301: HLLR

Best Arabidopsis Sequence Match ( AT1G61290.1 )
(BLAST)

001: MNDLFSSSFK KYTDLKQQAQ MDDIESGKET MNLDKFFEDV ENVKDNMKGV ETLYKSLQDS NEECKTVHNA KKVKELRAKM DGDVAQVLKR VKMIKQKLEA
101: LEKANANSRN VSGCGPGSST DRTRTSVVSG LGKKLKDLMD SFQGLRARMN AEYKETVERR YFTITGEQAD EQTIENLISS GESENFLQKA IQEQGRGQIL
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNDIESHVSK ASSFVRRGTD QLQDAREYQK SSRKWTCYAI LLFIVVFALL LIPALPHIML
301: MLK

Arabidopsis Description

SYP124Syntaxin-124 [Source:UniProtKB/Swiss-Prot;Acc:O64791]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.