Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G11250.1 | Thale cress | cytosol | 89.77 | 91.28 |
| KRH10761 | Soybean | cytosol | 79.54 | 79.28 |
| KRH21567 | Soybean | cytosol | 79.21 | 78.95 |
| KRH41917 | Soybean | cytosol | 77.89 | 77.63 |
| VIT_12s0059g02060.t01 | Wine grape | cytosol | 74.92 | 74.43 |
| Solyc12g005580.1.1 | Tomato | cytosol | 74.26 | 72.58 |
| PGSC0003DMT400035739 | Potato | cytosol | 74.26 | 72.58 |
| PGSC0003DMT400055777 | Potato | cytosol | 73.27 | 71.38 |
| Zm00001d036931_P001 | Maize | cytosol | 69.64 | 68.28 |
| Zm00001d046482_P001 | Maize | cytosol | 69.31 | 67.96 |
| AT4G03330.1 | Thale cress | cytosol | 68.32 | 67.87 |
| EER89986 | Sorghum | cytosol | 68.98 | 67.64 |
| GSMUA_Achr10P... | Banana | cytosol | 62.05 | 67.38 |
| GSMUA_Achr6P04820_001 | Banana | cytosol | 55.78 | 66.54 |
| TraesCS6B01G211000.1 | Wheat | cytosol | 65.68 | 65.25 |
| Os02t0209900-01 | Rice | cytosol | 66.67 | 64.95 |
| TraesCS6D01G169800.1 | Wheat | cytosol | 65.35 | 64.92 |
| TraesCS7A01G368400.1 | Wheat | cytosol | 65.35 | 64.71 |
| TraesCS7B01G260100.1 | Wheat | cytosol | 65.35 | 64.71 |
| TraesCS7D01G354500.1 | Wheat | cytosol | 64.36 | 63.73 |
| EES06503 | Sorghum | cytosol | 65.68 | 63.17 |
| Zm00001d053607_P001 | Maize | cytosol | 64.36 | 62.3 |
| AT3G11820.1 | Thale cress | cytosol, nucleus, plastid | 61.06 | 53.47 |
| TraesCS6A01G182200.1 | Wheat | cytosol | 66.01 | 52.91 |
| AT3G52400.1 | Thale cress | cytosol | 55.78 | 49.56 |
| AT1G08560.1 | Thale cress | cytosol | 46.53 | 45.48 |
| AT5G08080.3 | Thale cress | cytosol | 44.22 | 42.54 |
| AT3G03800.1 | Thale cress | cytosol | 42.57 | 42.16 |
| AT2G18260.1 | Thale cress | cytosol | 36.3 | 36.07 |
| HORVU7Hr1G085550.1 | Barley | cytosol | 37.29 | 35.87 |
| HORVU6Hr1G038490.4 | Barley | nucleus | 36.96 | 35.56 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | EntrezGene:842423 | ProteinID:AAC13912.1 | ProteinID:AEE33817.1 |
| ProteinID:ANM60085.1 | ArrayExpress:AT1G61290 | EnsemblPlantsGene:AT1G61290 | RefSeq:AT1G61290 | TAIR:AT1G61290 | RefSeq:AT1G61290-TAIR-G |
| EnsemblPlants:AT1G61290.2 | ncoils:Coil | EMBL:DQ446382 | GO:GO:0000003 | GO:GO:0000149 | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009856 | GO:GO:0009860 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016192 | GO:GO:0030133 |
| GO:GO:0030154 | GO:GO:0031201 | GO:GO:0040007 | GO:GO:0048278 | GO:GO:0061025 | InterPro:IPR000727 |
| RefSeq:NP_001319282.1 | RefSeq:NP_176324.1 | UniProt:O64791 | PFAM:PF00804 | PFAM:PF05739 | ScanProsite:PS00914 |
| PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF198 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE |
| SUPFAM:SSF47661 | Symbol:SYP124 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom |
| UniParc:UPI0000135420 | SEG:seg | : | : | : | : |
Description
SYP124Syntaxin-124 [Source:UniProtKB/Swiss-Prot;Acc:O64791]
Coordinates
chr1:+:22605005..22606385
Molecular Weight (calculated)
34470.2 Da
IEP (calculated)
6.386
GRAVY (calculated)
-0.571
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLFSSSFK KYTDLKQQAQ MDDIESGKET MNLDKFFEDV ENVKDNMKGV ETLYKSLQDS NEECKTVHNA KKVKELRAKM DGDVAQVLKR VKMIKQKLEA
101: LEKANANSRN VSGCGPGSST DRTRTSVVSG LGKKLKDLMD SFQGLRARMN AEYKETVERR YFTITGEQAD EQTIENLISS GESENFLQKA IQEQGRGQIL
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNDIESHVSK ASSFVRRGTD QLQDAREYQK SSRKWTCYAI LLFIVVFALL LIPALPHIML
301: MLK
101: LEKANANSRN VSGCGPGSST DRTRTSVVSG LGKKLKDLMD SFQGLRARMN AEYKETVERR YFTITGEQAD EQTIENLISS GESENFLQKA IQEQGRGQIL
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNDIESHVSK ASSFVRRGTD QLQDAREYQK SSRKWTCYAI LLFIVVFALL LIPALPHIML
301: MLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.