Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97497 | Canola | cytosol | 81.94 | 83.83 |
| Bra018615.1-P | Field mustard | cytosol | 82.58 | 83.39 |
| CDX95050 | Canola | cytosol | 82.58 | 83.39 |
| Bra030733.1-P | Field mustard | cytosol | 81.61 | 83.22 |
| CDY31137 | Canola | cytosol | 81.61 | 83.22 |
| CDX93553 | Canola | cytosol | 82.26 | 83.06 |
| VIT_04s0008g02770.t01 | Wine grape | cytosol | 71.61 | 71.38 |
| PGSC0003DMT400041982 | Potato | cytosol | 68.39 | 68.17 |
| Solyc06g053760.2.1 | Tomato | cytosol | 68.06 | 67.85 |
| GSMUA_Achr1P25170_001 | Banana | cytosol | 52.26 | 66.12 |
| KRH08461 | Soybean | cytosol | 67.1 | 64.6 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 33.55 | 63.8 |
| KRH70119 | Soybean | cytosol | 64.19 | 62.58 |
| KXG37622 | Sorghum | cytosol | 59.68 | 59.29 |
| Zm00001d013323_P001 | Maize | cytosol | 58.39 | 57.64 |
| Zm00001d033919_P001 | Maize | plasma membrane | 58.06 | 57.51 |
| Os03t0736500-01 | Rice | cytosol, plasma membrane | 57.1 | 56.91 |
| TraesCS4D01G066100.1 | Wheat | cytosol | 57.42 | 56.33 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 56.13 | 55.41 |
| TraesCS4A01G247700.1 | Wheat | cytosol | 56.13 | 55.06 |
| HORVU4Hr1G011180.2 | Barley | cytosol | 56.45 | 48.21 |
| AT1G61290.2 | Thale cress | cytosol | 45.48 | 46.53 |
| AT1G11250.1 | Thale cress | cytosol | 43.87 | 45.64 |
| AT4G03330.1 | Thale cress | cytosol | 43.23 | 43.93 |
| AT3G11820.1 | Thale cress | cytosol, nucleus, plastid | 43.87 | 39.31 |
| AT3G03800.1 | Thale cress | cytosol | 37.74 | 38.24 |
| AT5G08080.3 | Thale cress | cytosol | 37.74 | 37.14 |
| AT2G18260.1 | Thale cress | cytosol | 36.13 | 36.72 |
| AT3G52400.1 | Thale cress | cytosol | 39.68 | 36.07 |
| Zm00001d035331_P001 | Maize | cytosol | 25.81 | 26.85 |
| OQU78880 | Sorghum | cytosol | 25.81 | 25.97 |
| TraesCS6A01G147100.1 | Wheat | cytosol | 25.48 | 25.82 |
| TraesCS6B01G175300.1 | Wheat | cytosol | 25.48 | 25.82 |
| TraesCS6D01G136400.1 | Wheat | cytosol | 25.48 | 25.82 |
| HORVU6Hr1G028850.1 | Barley | cytosol | 25.16 | 25.49 |
| Os12t0192300-00 | Rice | plasma membrane | 25.48 | 22.7 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:13.4.2.3.1 | MapMan:22.7.1.1 | EntrezGene:837378 | UniProt:A0A178WAC8 |
| ProteinID:AAC49163.1 | ProteinID:AAF99783.1 | ProteinID:AEE28306.1 | ArrayExpress:AT1G08560 | EnsemblPlantsGene:AT1G08560 | RefSeq:AT1G08560 |
| TAIR:AT1G08560 | RefSeq:AT1G08560-TAIR-G | EnsemblPlants:AT1G08560.1 | TAIR:AT1G08560.1 | EMBL:BT000970 | ncoils:Coil |
| GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006887 | GO:GO:0006906 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009506 |
| GO:GO:0009524 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | GO:GO:0051301 | GO:GO:0061025 |
| InterPro:IPR000727 | RefSeq:NP_172332.1 | ProteinID:OAP15389.1 | PFAM:PF00804 | PFAM:PF05739 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00914 |
| PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF91 | UniProt:Q42374 | SMART:SM00397 | SMART:SM00503 |
| InterPro:SNARE | SUPFAM:SSF47661 | Symbol:SYP111 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
| InterPro:T_SNARE_dom | EMBL:U39451 | UniParc:UPI000013540B | SEG:seg | : | : |
Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
Coordinates
chr1:-:2709525..2711000
Molecular Weight (calculated)
35276.7 Da
IEP (calculated)
6.080
GRAVY (calculated)
-0.423
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.