Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- golgi 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH70119 | Soybean | cytosol | 89.44 | 90.57 |
VIT_04s0008g02770.t01 | Wine grape | cytosol | 76.4 | 79.1 |
PGSC0003DMT400041982 | Potato | cytosol | 74.22 | 76.85 |
Solyc06g053760.2.1 | Tomato | cytosol | 73.91 | 76.53 |
GSMUA_Achr1P25170_001 | Banana | cytosol | 53.73 | 70.61 |
CDY31137 | Canola | cytosol | 65.22 | 69.08 |
CDX97497 | Canola | cytosol | 64.91 | 68.98 |
Bra030733.1-P | Field mustard | cytosol | 64.91 | 68.75 |
CDX93553 | Canola | cytosol | 65.22 | 68.4 |
Bra018615.1-P | Field mustard | cytosol | 64.91 | 68.08 |
CDX95050 | Canola | cytosol | 64.6 | 67.75 |
KXG37622 | Sorghum | cytosol | 65.22 | 67.31 |
Zm00001d013323_P001 | Maize | cytosol | 65.53 | 67.2 |
AT1G08560.1 | Thale cress | cytosol | 64.6 | 67.1 |
Zm00001d033919_P001 | Maize | plasma membrane | 63.66 | 65.5 |
TraesCS4B01G067100.1 | Wheat | cytosol | 32.92 | 65.03 |
Os03t0736500-01 | Rice | cytosol, plasma membrane | 62.42 | 64.63 |
TraesCS4B01G067200.1 | Wheat | cytosol | 60.56 | 62.1 |
TraesCS4D01G066100.1 | Wheat | cytosol | 60.87 | 62.03 |
TraesCS4A01G247700.1 | Wheat | cytosol | 60.25 | 61.39 |
HORVU4Hr1G011180.2 | Barley | cytosol | 60.56 | 53.72 |
KRH41917 | Soybean | cytosol | 47.83 | 50.66 |
KRH10761 | Soybean | cytosol | 47.52 | 50.33 |
KRH21567 | Soybean | cytosol | 46.89 | 49.67 |
KRH76768 | Soybean | cytosol | 42.86 | 46.15 |
KRH28699 | Soybean | cytosol | 42.24 | 45.48 |
KRH32862 | Soybean | cytosol | 43.17 | 45.42 |
KRH26811 | Soybean | cytosol | 42.86 | 45.1 |
KRH72168 | Soybean | cytosol | 42.55 | 44.92 |
KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 41.93 | 44.12 |
KRH72169 | Soybean | cytosol | 44.41 | 42.69 |
KRH32861 | Soybean | mitochondrion | 43.17 | 41.87 |
KRH08507 | Soybean | cytosol | 38.51 | 40.26 |
KRH68016 | Soybean | cytosol | 36.02 | 39.46 |
KRG96271 | Soybean | cytosol, golgi, mitochondrion | 35.71 | 38.21 |
KRH59335 | Soybean | cytosol | 16.77 | 35.53 |
KRH70169 | Soybean | cytosol | 15.53 | 34.01 |
KRH43180 | Soybean | cytosol | 27.02 | 33.85 |
TraesCS6B01G175300.1 | Wheat | cytosol | 30.12 | 31.7 |
TraesCS6A01G147100.1 | Wheat | cytosol | 29.81 | 31.37 |
TraesCS6D01G136400.1 | Wheat | cytosol | 29.81 | 31.37 |
HORVU6Hr1G028850.1 | Barley | cytosol | 29.5 | 31.05 |
Zm00001d035331_P001 | Maize | cytosol | 28.26 | 30.54 |
OQU78880 | Sorghum | cytosol | 29.19 | 30.52 |
Os12t0192300-00 | Rice | plasma membrane | 30.43 | 28.16 |
Protein Annotations
Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100816016 | MapMan:13.4.2.3.1 | MapMan:22.7.1.1 | EMBL:ACUP02010176 |
ncoils:Coil | EnsemblPlantsGene:GLYMA_16G151200 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 |
GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 |
GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 |
GO:GO:0048278 | UniProt:I1MNS3 | InterPro:IPR000727 | EnsemblPlants:KRH08461 | ProteinID:KRH08461 | ProteinID:KRH08461.1 |
PFAM:PF00804 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF91 |
SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N |
TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000233BEBB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr16:-:31173115..31175417
Molecular Weight (calculated)
36294.2 Da
IEP (calculated)
7.093
GRAVY (calculated)
-0.320
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFT SYVDLKKAAM KEDVDLEAGV VVSSATPRNV ELTSSTTHLD TDMGLFLEEA EKVKAEMGSL RDILGRLQQA NEESKSLHKP EALKVLRARI
101: NADIVAVLKK ARAIRAQLEE MDRANAANRR LSGLKEGTPA IYRTRIAVTN GLRKKLKELM MEFQGLRQRM MSEYKDTVGR RYFTVTGEHP DEEVIEKIIA
201: NGNEEEVLGK AIQEHGRGKV LETVVEIQDR HDAAKEVEKS LLELHQVFLD MAVMVEAQGE KMDDIEHHVL HASHYVKDGT KNLQSAKEYQ KKSRKWMCIG
301: IILLLILILF IVIPVVTSLS SS
101: NADIVAVLKK ARAIRAQLEE MDRANAANRR LSGLKEGTPA IYRTRIAVTN GLRKKLKELM MEFQGLRQRM MSEYKDTVGR RYFTVTGEHP DEEVIEKIIA
201: NGNEEEVLGK AIQEHGRGKV LETVVEIQDR HDAAKEVEKS LLELHQVFLD MAVMVEAQGE KMDDIEHHVL HASHYVKDGT KNLQSAKEYQ KKSRKWMCIG
301: IILLLILILF IVIPVVTSLS SS
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Arabidopsis Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.