CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH03094
KRH08461
KRH32861	plasma membrane
KRH54642
KRH56857
KRH63266
KRH70119
KRH72169	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12360.1	KRH08461	AT1G08560.1	11157980
AT1G12360.1	KRH70119	AT1G08560.1	11157980
AT1G12360.1	KRH32861	AT3G11820.1	23572542
AT1G12360.1	KRH72169	AT3G11820.1	23572542
AT1G12360.1	KRH32861	AT3G11820.1	23572542
AT1G12360.1	KRH72169	AT3G11820.1	23572542
AT1G12360.1	KRH03094	AT5G07880.1	11591731
AT1G12360.1	KRH54642	AT5G07880.1	11591731
AT1G12360.1	KRH56857	AT5G07880.1	11591731
AT1G12360.1	KRH63266	AT5G07880.1	11591731
AT1G12360.1	KRH03094	AT5G61210.1	11591731
AT1G12360.1	KRH54642	AT5G61210.1	11591731
AT1G12360.1	KRH56857	AT5G61210.1	11591731
AT1G12360.1	KRH63266	AT5G61210.1	11591731

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77416	Soybean	cytosol	94.12	91.9
KRH57307	Soybean	cytosol, nucleus	85.37	85.11
KRH04038	Soybean	cytosol	84.62	84.23
CDY26558	Canola	cytosol	19.31	80.5
Os02t0452500-01	Rice	cytosol, plasma membrane	13.42	77.39
Bra026974.1-P	Field mustard	cytosol	77.53	77.18
CDY26559	Canola	cytosol	77.53	77.18
CDY15993	Canola	cytosol	77.38	76.91
AT1G12360.1	Thale cress	cytosol	76.92	76.58
Bra019760.1-P	Field mustard	cytosol	73.3	76.18
VIT_13s0019g05000.t01	Wine grape	cytosol	76.32	76.09
CDX98070	Canola	cytosol	76.32	76.09
CDY30074	Canola	cytosol	76.62	76.05
Solyc08g079520.2.1	Tomato	nucleus	74.81	74.47
KRH65274	Soybean	cytosol	65.46	64.87
KRH76261	Soybean	nucleus	65.46	64.78
KRH64544	Soybean	endoplasmic reticulum	17.8	20.77
KRH53395	Soybean	cytosol	17.5	20.42
KRH58359	Soybean	endoplasmic reticulum	17.65	18.81
KRH42240	Soybean	endoplasmic reticulum, nucleus	17.65	18.81

Protein Annotations

Gene3D:1.25.40.60	EntrezGene:100783306	MapMan:13.4.2.4	Gene3D:3.40.50.1910	Gene3D:3.40.50.2060	Gene3D:3.90.830.10
EMBL:ACUP02006738	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G029600	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150
GO:GO:0009987	GO:GO:0016192	UniProt:I1LGL2	InterPro:IPR027482	EnsemblPlants:KRH28021	ProteinID:KRH28021
ProteinID:KRH28021.1	PFAM:PF00995	PIRSF:PIRSF005715	PANTHER:PTHR11679	PANTHER:PTHR11679:SF59	SUPFAM:SSF56815
InterPro:Sec-1-like_dom2	InterPro:Sec1-like	InterPro:Sec1-like_sf	UniParc:UPI000233C276	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:-:2138474..2149522

Molecular Weight (calculated)

75783.4 Da

IEP (calculated)

8.372

GRAVY (calculated)

-0.472

Length

663 amino acids

Sequence
(BLAST)

001: MSMSDSDSSS YAGADYKSFK QISRERLLHE MLRSSKTGDS KSTWKVLIMD KLTVKIMSHS CKMTDITDEG VSLVEDIYKR RQPLPTMDAI YFIQPTRENV
101: IMFLSDMSGR TPLYRKAFVF FSSAISKELV MDIKKDTKVL TRLGALREMN LEYFPIDSQG FITNNERALE ELFGDEENNH KGVTCLNVMA KRIATVFASL
201: REFPSVRFRA AKSLDATTMT TFRDLIPTKL AAGVWDCLMK YKKSIPNFPQ TETCELLIVD RSIDQIAPVI HEWTYDAMCH DLLNMEGNKY VHEVPGKSGG
301: PAERKEVLLE DHDPIWLELR HAHIAYASEQ LHEKMTNFIS KNKAAQIQHG SKSSSEMSTR DIQKMVQALP QYSEQIDKLS LHVEIAGKIN RIIRESGLRE
401: LGQLEQDLVF GDATTKDVIK FFTMTEDIAH ENKLRLLMIL ASVCPEKFEG EKGQNLMRLA KLTEEDMNVV HNMRMLGGQP VTKKKLTTAF GLKFDIHKKK
501: RAARKDRPGE EEKWQLSRFY PIIEELLEKL TKNELSKEDY PCLNDPSPSY HGSPFSGPVN QNPHSMRSRR TPTWARPRGS EDGYSSDSVL RHASSDFRRM
601: GQRIFVFIVG GATRSELRVC HKLTEKLKRE IILGSSSLDD PAQFITKLKM ITTHELSLDD IQI

Best Arabidopsis Sequence Match ( AT1G12360.1 )
(BLAST)

001: MSYSDSDSSS HGGEYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI
101: MFLSDMSGKS PLYKKAFVFF SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK GDACLNVMAS RIATVFASLR
201: EFPAVRYRAA KSLDASTMTT LRDLIPTKLA AGIWNCLAKH KQSIENFPQT ETCELLILDR SIDQIAPVIH EWTYDAMCHD LLNMEGNKYV HVIPSKSGGQ
301: PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQGKR DGAELSTRDL QKMVQALPQY SEQIDKLSLH VEIARKLNDL IREQGLRELG
401: QLEQDLVFGD AGMKDVIKYL STQEEASREG KLRLLMILAT IYPEKFEGEK GQNLMKLAKL SSDDMTAVNN MSLLGSAVDA KKNTPGGFTL KFDLHKKKRA
501: VRKERQEEAA WQLSRFYPMI EELIEKLSKG ELPKEDFPCM NDPSPSFHGS TSLSSAASSS QGQAAQSMRS RRTPTWAKPR GSDDGYSSDS VLRHASSDFR
601: KMGQRIFVFI VGGATRSELK VCHKLSTKLK REVILGSTSL DDPPQFITKL KLLTANDDLS LDDLQI

Arabidopsis Description

KEUSNARE-interacting protein KEULE [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.