Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76261 | Soybean | nucleus | 95.52 | 95.37 |
| VIT_15s0048g00970.t01 | Wine grape | cytosol | 69.51 | 75.24 |
| Bra032660.1-P | Field mustard | cytosol | 63.68 | 71.48 |
| VIT_15s0045g00060.t01 | Wine grape | cytosol | 48.43 | 71.05 |
| Solyc01g091290.2.1 | Tomato | cytosol, unclear | 19.58 | 70.43 |
| PGSC0003DMT400020076 | Potato | cytosol | 54.56 | 69.92 |
| CDY38041 | Canola | nucleus | 70.25 | 69.63 |
| GSMUA_Achr9P24460_001 | Banana | cytosol | 68.46 | 69.08 |
| Solyc01g091300.2.1 | Tomato | nucleus | 54.11 | 68.95 |
| AT1G02010.4 | Thale cress | cytosol, nucleus, peroxisome | 71.3 | 67.85 |
| KRH57307 | Soybean | cytosol, nucleus | 65.77 | 66.17 |
| KRH04038 | Soybean | cytosol | 65.77 | 66.07 |
| Os06t0135900-01 | Rice | plasma membrane | 51.27 | 65.71 |
| KRH28021 | Soybean | nucleus | 64.87 | 65.46 |
| KXG19223 | Sorghum | cytosol | 62.63 | 64.07 |
| KRH77416 | Soybean | cytosol | 63.68 | 62.74 |
| TraesCS3A01G538700.1 | Wheat | cytosol | 60.69 | 61.8 |
| TraesCS3B01G607200.1 | Wheat | cytosol | 60.69 | 61.8 |
| TraesCS3D01G542100.1 | Wheat | cytosol | 60.69 | 61.8 |
| Zm00001d045434_P004 | Maize | cytosol | 62.18 | 60.38 |
| HORVU3Hr1G117280.1 | Barley | cytosol | 60.54 | 59.73 |
| KRH64544 | Soybean | endoplasmic reticulum | 17.49 | 20.6 |
| KRH53395 | Soybean | cytosol | 17.04 | 20.07 |
| KRH58359 | Soybean | endoplasmic reticulum | 17.94 | 19.29 |
| KRH42240 | Soybean | endoplasmic reticulum, nucleus | 17.94 | 19.29 |
Protein Annotations
| EMBL:ACUP02001322 | EnsemblPlants:KRH65274 | EnsemblPlantsGene:GLYMA_03G024100 | EntrezGene:100783301 | Gene3D:3.40.50.2060 | GO:GO:0006810 |
| GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | InterPro:Sec1-like | InterPro:Sec1-like_sf |
| PANTHER:PTHR11679 | PANTHER:PTHR11679:SF59 | PFAM:PF00995 | PIRSF:PIRSF005715 | ProteinID:KRH65274 | ProteinID:KRH65274.1 |
| SEG:seg | SUPFAM:SSF56815 | UniParc:UPI00023397B7 | UniProt:I1JKM0 | MapMan:13.4.2.4 | : |
Description
hypothetical protein
Coordinates
chr3:-:2558792..2570503
Molecular Weight (calculated)
76031.2 Da
IEP (calculated)
8.010
GRAVY (calculated)
-0.499
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSDSETPY GGGTEYKPFR HISRDRLLIE MLRSAKSPDS KAWKVLIMDK VTVKVMSHSC KMADITDQEI SLVEDLFRRR QPLPSLDAVY FMQPSKENVV
101: MFLSDMSGRE PLYKKAYVFF SSPIPKELVN HIKCDTSVLP RIGALREMNL EYFPIDSQGF ITDQETAMEE LYGNIENTRR FNTCLNNMAI RIATVFASLK
201: ELPCVWYRAA KDSDESTATA VRELVPTKLA NAVWDMVSKY KSTIPGFPQN ETCDMLIVDR SVDQIAPVIH EWTYDAMCHD LLTMDGDKYM HEVPSKVGGQ
301: PEIKEVILQD HDSVWLELRH THIADASERL HEKFTNFVSK NKAAQIQQSG RDGSELSTRD LQKMVQALPQ YTEQVEKISL HVEIAGKINK IIRETDLREL
401: GQLEQDLVFG DAGAKEVINF LRTKQNTTPE YKLRLLMIYA SVYPEKFEGD KASKLMQLAK LSPDDMKVIS NMQQLAGSSN KKSSAAGGFS LKFSNQKTKQ
501: AARKDRTEEE ETWQLFRFYP MLEELIENLS KGELAKNEYS CINEPNPSNA RGSVRISKQT QTPPTTAPHS MRSRRTANWG RARTSDDGYS SDSTLKNVTT
601: DFKRMGKRIF VFIIGGATRS ELRVCHKLTP KLKREVILGT TSMDDPPQYL TKLKLLFDNN VSQLNGLGI
101: MFLSDMSGRE PLYKKAYVFF SSPIPKELVN HIKCDTSVLP RIGALREMNL EYFPIDSQGF ITDQETAMEE LYGNIENTRR FNTCLNNMAI RIATVFASLK
201: ELPCVWYRAA KDSDESTATA VRELVPTKLA NAVWDMVSKY KSTIPGFPQN ETCDMLIVDR SVDQIAPVIH EWTYDAMCHD LLTMDGDKYM HEVPSKVGGQ
301: PEIKEVILQD HDSVWLELRH THIADASERL HEKFTNFVSK NKAAQIQQSG RDGSELSTRD LQKMVQALPQ YTEQVEKISL HVEIAGKINK IIRETDLREL
401: GQLEQDLVFG DAGAKEVINF LRTKQNTTPE YKLRLLMIYA SVYPEKFEGD KASKLMQLAK LSPDDMKVIS NMQQLAGSSN KKSSAAGGFS LKFSNQKTKQ
501: AARKDRTEEE ETWQLFRFYP MLEELIENLS KGELAKNEYS CINEPNPSNA RGSVRISKQT QTPPTTAPHS MRSRRTANWG RARTSDDGYS SDSTLKNVTT
601: DFKRMGKRIF VFIIGGATRS ELRVCHKLTP KLKREVILGT TSMDDPPQYL TKLKLLFDNN VSQLNGLGI
001: MSFSDSESSS HGGGGGDYKF FRQISRDRLL HEMLGSTKTG DSKAWKILIM DRVTVKVMSQ SCKMADITDQ GISLVEELFK RREPMPGMDA IYFIQPSKEN
101: IVMFLSDMSG REPLYRKAFI FFSSTIPKEL VNHIKSDSSV LPRIGALREM NMEYFPIDNQ GFLTDHEQAL ETLYAEDAEN SRHFHICLNI MATRIATVFA
201: SLKELPFVRY RAAKSTASRD LVPSKLAAAI WDCISKYKAI PNFPQTETCE LLIVDRSVDQ IAPIIHEWTY DAMCHDLLDM EGNKHVIEVP SKTGGPPEKK
301: EIVLEDHDPV WLELRHTHIA DASERLHEKM TNFASKNKAA QMRSRDGSEL STRDLQKIVQ ALPQYGEQVD KLSTHVELAG KINRIIRDTG LRDLGQLEQD
401: LVFGDAGAKD VINFLRTNQD TNPENKLRLL MIYATVYPEK FEGDKGVKLM QLARLSPVDM KVISNMQLIA GSPENKAKSG SFSLKFDAGK TKQANRKDRS
501: GEEETWQLFR FYPMIEELLE KLVKGDLSKS DYLCMNQSSH KEESEARTGS VRKSSAPTAV PERKATPHSM RSRRTATWAR PHSSDDGYSS DSVLKSASTE
601: FKKLGQRIFV FIIGGATRSE LRVCHKLTSS LRREVVLGST SFDDPPQYIT KLKLLSEKDI QGAPAQPFKP QYW
101: IVMFLSDMSG REPLYRKAFI FFSSTIPKEL VNHIKSDSSV LPRIGALREM NMEYFPIDNQ GFLTDHEQAL ETLYAEDAEN SRHFHICLNI MATRIATVFA
201: SLKELPFVRY RAAKSTASRD LVPSKLAAAI WDCISKYKAI PNFPQTETCE LLIVDRSVDQ IAPIIHEWTY DAMCHDLLDM EGNKHVIEVP SKTGGPPEKK
301: EIVLEDHDPV WLELRHTHIA DASERLHEKM TNFASKNKAA QMRSRDGSEL STRDLQKIVQ ALPQYGEQVD KLSTHVELAG KINRIIRDTG LRDLGQLEQD
401: LVFGDAGAKD VINFLRTNQD TNPENKLRLL MIYATVYPEK FEGDKGVKLM QLARLSPVDM KVISNMQLIA GSPENKAKSG SFSLKFDAGK TKQANRKDRS
501: GEEETWQLFR FYPMIEELLE KLVKGDLSKS DYLCMNQSSH KEESEARTGS VRKSSAPTAV PERKATPHSM RSRRTATWAR PHSSDDGYSS DSVLKSASTE
601: FKKLGQRIFV FIIGGATRSE LRVCHKLTSS LRREVVLGST SFDDPPQYIT KLKLLSEKDI QGAPAQPFKP QYW
Arabidopsis Description
SEC1Asecretory 1A [Source:TAIR;Acc:AT1G02010]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.