Factsheet for Bra032660.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38041	Canola	nucleus	97.48	86.07
AT1G02010.4	Thale cress	cytosol, nucleus, peroxisome	95.97	81.37
Solyc01g091290.2.1	Tomato	cytosol, unclear	20.97	67.2
Os06t0135900-01	Rice	plasma membrane	56.54	64.56
KRH65274	Soybean	cytosol	71.48	63.68
VIT_15s0048g00970.t01	Wine grape	cytosol	65.77	63.43
KRH76261	Soybean	nucleus	70.81	62.99
GSMUA_Achr9P24460_001	Banana	cytosol	66.11	59.43
PGSC0003DMT400020076	Potato	cytosol	51.51	58.81
Bra026974.1-P	Field mustard	cytosol	65.27	58.41
VIT_15s0045g00060.t01	Wine grape	cytosol	44.3	57.89
Solyc01g091300.2.1	Tomato	nucleus	50.67	57.52
Bra019760.1-P	Field mustard	cytosol	61.58	57.52
KXG19223	Sorghum	cytosol	62.75	57.19
TraesCS3D01G542100.1	Wheat	cytosol	60.07	54.49
TraesCS3B01G607200.1	Wheat	cytosol	60.07	54.49
TraesCS3A01G538700.1	Wheat	cytosol	60.07	54.49
Zm00001d045434_P004	Maize	cytosol	62.08	53.7
HORVU3Hr1G117280.1	Barley	cytosol	60.07	52.8
Bra029438.1-P	Field mustard	cytosol	57.38	51.9
Bra000761.1-P	Field mustard	cytosol	57.72	50.74
Bra008294.1-P	Field mustard	cytosol	16.61	17.4
Bra032934.1-P	Field mustard	cytosol	8.22	15.76
Bra024484.1-P	Field mustard	cytosol	16.61	15.54
Bra038812.1-P	Field mustard	plastid	3.19	14.84

Protein Annotations

Gene3D:1.25.40.60	MapMan:13.4.2.4	Gene3D:3.40.50.1910	Gene3D:3.40.50.2060	Gene3D:3.90.830.10	EnsemblPlantsGene:Bra032660
EnsemblPlants:Bra032660.1	EnsemblPlants:Bra032660.1-P	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009987
GO:GO:0016192	InterPro:IPR027482	UniProt:M4EV27	PFAM:PF00995	PIRSF:PIRSF005715	PANTHER:PTHR11679
PANTHER:PTHR11679:SF59	SUPFAM:SSF56815	InterPro:Sec-1-like_dom2	InterPro:Sec1-like	InterPro:Sec1-like_sf	UniParc:UPI0002543170

Description

AT1G02010 (E=0.0) | SEC1A (SIMILAR TO ELECTRON CAREER 1A); protein transporter

Coordinates

chrA09:+:37055841..37059246

Molecular Weight (calculated)

67766.1 Da

IEP (calculated)

7.687

GRAVY (calculated)

-0.554

Length

596 amino acids

Sequence
(BLAST)

001: MSFSDSESSS HPRDGGDYKF FRQISRDRLL HEMLGSTKTG DSKAWKILIM DRVTVKVMSK SCKMADITDQ GISLVEELFK RREPMPGMDA IYFIQPSKEN
101: IVMFLSDMSG REPLYRKAFI FFSSTIPKEL VNHIKSDSSV LPRIGALREM NMEYFPIDNQ GFLTDHDQAL QTLYAEDAEN SRHFNICLNM MATRISTVFA
201: SLKELPFVRY RAAKSTAPRD LVPSKLAAAI WDCISKFKAI PNFPQTETCE LLIVDRSVDQ IAPIIHEWTY DAMCHDLLDM EGNKHVIEVP SKTGGPPEKK
301: EIVLEDHDPV WLELRHTHIA DASERLHEKM TNFASKNKAA QMRSKEGSEL STRDLQKIVQ ALPQYGEQVD KLSTHVEIAG KINRIIRDTG LRDLGQLEQD
401: LVFGDAAAKD VINFLRTNQD TNPENKLRLL MIYATVYPEK FEGDKGVKLM QLAKLSPVDM KVISNMQLIA GSPENKTKSG SFSLKFDTGK TKQANRKDRS
501: GEEETWQLFR FYPMLEELLE KLVKGDLSKS DYLCMNQSSH KEEESESRTG SVRKSSAPTA VPERKATPHS MRSRRTATWA RPHSSDDGYS RQSKTL

Best Arabidopsis Sequence Match ( AT1G02010.3 )
(BLAST)

001: MSFSDSESSS HGGGGGDYKF FRQISRDRLL HEMLGSTKTG DSKAWKILIM DRVTVKVMSQ SCKMADITDQ GISLVEELFK RREPMPGMDA IYFIQPSKEN
101: IVMFLSDMSG REPLYRKAFI FFSSTIPKEL VNHIKSDSSV LPRIGALREM NMEYFPIDNQ GFLTDHEQAL ETLYAEDAEN SRHFHICLNI MATRIATVFA
201: SLKELPFVRY RAAKSTASRD LVPSKLAAAI WDCISKYKAI PNFPQTETCE LLIVDRSVDQ IAPIIHEWTY DAMCHDLLDM EGNKHVIEVP SKTGGPPEKK
301: EIVLEDHDPV WLELRHTHIA DASERLHEKM TNFASKNKAA QMRSRDGSEL STRDLQKIVQ ALPQYGEQVD KLSTHVELAG KINRIIRDTG LRDLGQLEQD
401: LVFGDAGAKD VINFLRTNQD TNPENKLRLL MIYATVYPEK FEGDKGVKLM QLARLSPVDM KVISNMQLIA GSPENKAKSG SFSLKFDAGK TKQANRKDRS
501: GEEETWQLFR FYPMIEELLE KLVKGDLSKS DYLCMNQSSH KEESEARTGS VRKSSAPTAV PERKATPHSM RSRRTATWAR PHSSDDGYSR HSILHNDFLF
601: FGPFERSLDF F

Arabidopsis Description

SEC1Asecretory 1A [Source:TAIR;Acc:AT1G02010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.