Factsheet for Bra032934.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi, nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48989	Canola	cytosol	94.86	95.78
PGSC0003DMT400043339	Potato	cytosol	36.33	34.45
VIT_03s0038g03110.t01	Wine grape	cytosol	58.84	30.81
Zm00001d005839_P001	Maize	cytosol, golgi, plastid	47.27	30.18
KRH58359	Soybean	endoplasmic reticulum	59.49	29.74
PGSC0003DMT400038058	Potato	cytosol	58.84	29.52
KRH42240	Soybean	endoplasmic reticulum, nucleus	58.84	29.42
Bra024484.1-P	Field mustard	cytosol	60.13	29.36
Solyc01g112150.2.1	Tomato	plastid	58.52	29.35
EES06083	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	53.05	26.36
TraesCS5D01G045800.1	Wheat	plastid	52.09	26.13
TraesCS5B01G039900.1	Wheat	cytosol, mitochondrion	52.09	26.13
TraesCS5A01G038500.1	Wheat	cytosol, mitochondrion	52.09	26.05
Zm00001d051824_P001	Maize	plasma membrane	52.09	25.8
OQU91892	Sorghum	cytosol, mitochondrion	50.8	25.32
HORVU5Hr1G009740.2	Barley	cytosol, mitochondrion	52.09	25.27
Os03t0620800-01	Rice	plasma membrane	50.48	25.2
Zm00001d030527_P001	Maize	cytosol, mitochondrion	50.16	25.12
GSMUA_Achr3P26940_001	Banana	cytosol	45.02	24.73
Bra008294.1-P	Field mustard	cytosol	17.36	9.49
Bra032660.1-P	Field mustard	cytosol	15.76	8.22
Bra019760.1-P	Field mustard	cytosol	16.72	8.15
Bra026974.1-P	Field mustard	cytosol	16.72	7.81
AT4G31740.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	4.18	7.6
Bra029438.1-P	Field mustard	cytosol	16.08	7.59
Bra000761.1-P	Field mustard	cytosol	16.08	7.37
Bra038812.1-P	Field mustard	plastid	0.32	0.78

Protein Annotations

EnsemblPlants:Bra032934.1	EnsemblPlants:Bra032934.1-P	EnsemblPlantsGene:Bra032934	Gene3D:3.40.50.1910	Gene3D:3.90.830.10	GO:GO:0006810
GO:GO:0006904	GO:GO:0008150	GO:GO:0009987	GO:GO:0016192	InterPro:IPR027482	InterPro:Sec-1-like_dom2
InterPro:Sec1-like	InterPro:Sec1-like_sf	ncoils:Coil	PANTHER:PTHR11679	PANTHER:PTHR11679:SF60	PFAM:PF00995
SUPFAM:SSF56815	UniParc:UPI0002545998	UniProt:M4EVV1	MapMan:35.1	:	:

Description

AT2G17980 (E=1e-027) ATSLY1 | ATSLY1; protein transporter

Coordinates

chrA02:-:22430729..22432341

Molecular Weight (calculated)

34523.3 Da

IEP (calculated)

5.064

GRAVY (calculated)

-0.105

Length

311 amino acids

Sequence
(BLAST)

001: MLSNFVDVDT MSVIFADEDV TWTLHHSCSI ESVHDQHLEF VALEDNLFSL SQHSVYAQLN DPSATGGGDV EEMVEKIADD LFHVLATLGV VHVIRCPVGG
101: AAEMVAVSLD TKLRHHLRLL NFDLAVGIQH DFRYRPLVHD LLGLKLNGLV IPGAQKKKIF LDTSSSDPFW SSANTSLEFP QVASEIEAHL NKYKQDVEEV
201: SRSTDLIGGG NTKHLMDSVN SLPDLTDRKQ VIDIDKHTNI ATFLLGQIKE RSLDVYTTKE NAMMMGGARI NLSDLPSVLK SKGTKMDKLR FAIIYLLSLD
301: TPDLEANKEN I

Best Arabidopsis Sequence Match ( AT2G17980.1 )
(BLAST)

001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH

Arabidopsis Description

SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.