Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051824_P001 | Maize | plasma membrane | 94.89 | 94.59 |
| OQU91892 | Sorghum | cytosol, mitochondrion | 79.23 | 79.49 |
| GSMUA_Achr3P26940_001 | Banana | cytosol | 62.62 | 69.26 |
| KRH58359 | Soybean | endoplasmic reticulum | 67.25 | 67.68 |
| Solyc01g112150.2.1 | Tomato | plastid | 66.45 | 67.1 |
| KRH42240 | Soybean | endoplasmic reticulum, nucleus | 66.61 | 67.04 |
| PGSC0003DMT400038058 | Potato | cytosol | 66.29 | 66.94 |
| AT4G31740.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.21 | 66.67 |
| VIT_03s0038g03110.t01 | Wine grape | cytosol | 62.94 | 66.33 |
| CDY63506 | Canola | cytosol | 62.62 | 65.12 |
| CDY52164 | Canola | cytosol | 5.59 | 64.81 |
| CDY29213 | Canola | cytosol | 62.3 | 64.78 |
| AT2G17980.1 | Thale cress | mitochondrion | 64.22 | 64.11 |
| PGSC0003DMT400043339 | Potato | cytosol | 33.23 | 63.41 |
| Bra024484.1-P | Field mustard | cytosol | 64.38 | 63.27 |
| CDY52165 | Canola | cytosol | 32.91 | 57.22 |
| CDY39875 | Canola | cytosol | 28.91 | 55.35 |
| CDY48989 | Canola | cytosol | 26.36 | 53.57 |
| Bra032934.1-P | Field mustard | cytosol | 26.36 | 53.05 |
| EES13788 | Sorghum | cytosol | 19.81 | 21.87 |
| OQU84878 | Sorghum | nucleus | 21.09 | 19.97 |
| KXG25933 | Sorghum | cytosol, plastid | 20.77 | 19.49 |
| KXG19223 | Sorghum | cytosol | 18.37 | 17.58 |
Protein Annotations
| Gene3D:1.25.40.60 | Gene3D:3.40.50.1910 | Gene3D:3.40.50.2060 | Gene3D:3.90.830.10 | MapMan:35.1 | EntrezGene:8066458 |
| UniProt:C5XWT6 | ncoils:Coil | EnsemblPlants:EES06083 | ProteinID:EES06083 | ProteinID:EES06083.1 | GO:GO:0006810 |
| GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | InterPro:IPR027482 | PFAM:PF00995 |
| PIRSF:PIRSF005715 | PANTHER:PTHR11679 | PANTHER:PTHR11679:SF60 | EnsemblPlantsGene:SORBI_3004G358900 | SUPFAM:SSF56815 | unigene:Sbi.9268 |
| InterPro:Sec-1-like_dom2 | InterPro:Sec1-like | InterPro:Sec1-like_sf | UniParc:UPI0001A85D8D | RefSeq:XP_002453107.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:68561929..68565024
Molecular Weight (calculated)
68324.8 Da
IEP (calculated)
5.979
GRAVY (calculated)
-0.116
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALSLRQKQ LDLILRMLHL NQPPPPPGAA AEQEEEVYKI LVLDTFCLSL LSPLLRVADL RKHGVTLYFP IDKPRQQVAD APAVYFLRPT QANADRVAAD
101: AAASLYASFH LNFSSALPRP LLDRLAAATA ASGSAHRVAR LADQYLDFVS LEDNLFSLAH PRSYVALNDP KAADADIEAL VDAIALGLFC VAATLGTVPV
201: IRCPRGGPAE MVAAALDARL RDHLLAKPNL FTEASASVAS FQRPVLCLFD RNFDLSVGIQ HDWSYRPLVH DVLGLKLNKL KMPADKSGPA KTYDLDGSDA
301: FWVANSWSPF PRVAEEIESQ LAKYKQDVDE VNQRTGGSKD GIEFDGTDLI GNTKHLMNAV NSLPELTERK KMIDKHTNIA TVLLGHIKER SLDGYCDCEN
401: DMLTKGTVDR SALLGLLRGK GTKEDKLRLA VTYLLSFETP VASELEQVEA ALREAEVDMS AFQYVKRVKS LNTQFSASSN TATRSNIVDW AEKLYGQSIS
501: AVTAGVKNLL STGRQLALTR TVEALMEGKP NPEVDSYLLF DPRALRSGSG GQFKGPFREA IVFMIGGGNY IEYRSLMELA ECSQPSKHVI YGATEIVNGV
601: EFIEQLAELG QKAGLCGGVN NPPPLQ
101: AAASLYASFH LNFSSALPRP LLDRLAAATA ASGSAHRVAR LADQYLDFVS LEDNLFSLAH PRSYVALNDP KAADADIEAL VDAIALGLFC VAATLGTVPV
201: IRCPRGGPAE MVAAALDARL RDHLLAKPNL FTEASASVAS FQRPVLCLFD RNFDLSVGIQ HDWSYRPLVH DVLGLKLNKL KMPADKSGPA KTYDLDGSDA
301: FWVANSWSPF PRVAEEIESQ LAKYKQDVDE VNQRTGGSKD GIEFDGTDLI GNTKHLMNAV NSLPELTERK KMIDKHTNIA TVLLGHIKER SLDGYCDCEN
401: DMLTKGTVDR SALLGLLRGK GTKEDKLRLA VTYLLSFETP VASELEQVEA ALREAEVDMS AFQYVKRVKS LNTQFSASSN TATRSNIVDW AEKLYGQSIS
501: AVTAGVKNLL STGRQLALTR TVEALMEGKP NPEVDSYLLF DPRALRSGSG GQFKGPFREA IVFMIGGGNY IEYRSLMELA ECSQPSKHVI YGATEIVNGV
601: EFIEQLAELG QKAGLCGGVN NPPPLQ
001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
Arabidopsis Description
SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.