Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48989 | Canola | cytosol | 61.67 | 72.08 |
| CDY63506 | Canola | cytosol | 62.5 | 37.38 |
| CDY29213 | Canola | cytosol | 62.22 | 37.21 |
| EES06083 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 57.22 | 32.91 |
| Zm00001d005839_P001 | Maize | cytosol, golgi, plastid | 44.17 | 32.65 |
| Zm00001d051824_P001 | Maize | plasma membrane | 56.67 | 32.48 |
| TraesCS5B01G039900.1 | Wheat | cytosol, mitochondrion | 55.83 | 32.42 |
| TraesCS5D01G045800.1 | Wheat | plastid | 55.83 | 32.42 |
| GSMUA_Achr3P26940_001 | Banana | cytosol | 50.83 | 32.33 |
| TraesCS5A01G038500.1 | Wheat | cytosol, mitochondrion | 55.83 | 32.32 |
| Os03t0620800-01 | Rice | plasma membrane | 55.83 | 32.26 |
| Zm00001d030527_P001 | Maize | cytosol, mitochondrion | 54.17 | 31.4 |
| HORVU5Hr1G009740.2 | Barley | cytosol, mitochondrion | 55.83 | 31.36 |
| OQU91892 | Sorghum | cytosol, mitochondrion | 53.61 | 30.93 |
| CDY39875 | Canola | cytosol | 24.44 | 26.91 |
| CDX79223 | Canola | cytosol, plastid | 3.89 | 21.21 |
| CDY70457 | Canola | cytosol | 15.83 | 15.92 |
| CDX79215 | Canola | cytosol | 13.89 | 12.08 |
| CDY38360 | Canola | cytosol | 17.5 | 11.07 |
| CDY38041 | Canola | nucleus | 17.5 | 9.33 |
| CDX86721 | Canola | cytosol | 16.94 | 9.26 |
| CDY13575 | Canola | cytosol | 14.72 | 9.25 |
| CDX90817 | Canola | cytosol | 16.94 | 9.12 |
| CDY30074 | Canola | cytosol | 16.67 | 8.98 |
| CDY68111 | Canola | cytosol | 16.67 | 8.97 |
| CDY26559 | Canola | cytosol | 16.39 | 8.86 |
| CDY15993 | Canola | cytosol | 16.39 | 8.85 |
| CDX98070 | Canola | cytosol | 16.11 | 8.72 |
| CDX94488 | Canola | cytosol | 16.11 | 8.72 |
| CDX79222 | Canola | cytosol, mitochondrion | 6.39 | 8.49 |
| CDY71507 | Canola | cytosol, golgi | 6.67 | 8.08 |
| CDY26558 | Canola | cytosol | 3.33 | 7.55 |
| CDX79189 | Canola | cytosol | 5.0 | 6.55 |
| CDY52164 | Canola | cytosol | 0.28 | 1.85 |
| CDY49318 | Canola | plastid | 0.28 | 0.82 |
Protein Annotations
| Gene3D:3.40.50.1910 | Gene3D:3.40.50.2060 | Gene3D:3.90.830.10 | MapMan:35.1 | GO:A0A078IM59 | UniProt:A0A078IM59 |
| EnsemblPlants:CDY52165 | ProteinID:CDY52165 | ProteinID:CDY52165.1 | ncoils:Coil | GO:GO:0006810 | GO:GO:0006904 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 | EnsemblPlantsGene:GSBRNA2T00005004001 | InterPro:IPR027482 | PFAM:PF00995 |
| PANTHER:PTHR11679 | PANTHER:PTHR11679:SF60 | SUPFAM:SSF56815 | InterPro:Sec-1-like_dom2 | InterPro:Sec1-like | InterPro:Sec1-like_sf |
| UniParc:UPI0004EEF807 | SEG:seg | : | : | : | : |
Description
BnaC02g48050DBnaC02g48050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM59]
Coordinates
chrLK033061:-:24562..25924
Molecular Weight (calculated)
39804.5 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.210
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MCIPDAEPER NFGSKRRRGM FQDVSSSLYD TFHLNFSSSI PRPLLKNLAS GTLHHSCSIE SVHDQHLEDN LFSLSQHSVY AQLNDPSATG GDVEEIADGL
101: FHVLETLGVV PVIRCPVGGA AEMVAVSLDT KLRHHLRLLS KNNNLMTTRP LLCIFDRNFD LAVGIQHDFR CRPLVHDLLG LKLNGLVIPG AQKKKILFLD
201: TSSSDPFWSS NASLEFPQVA SEIEAHLNKY KEDVEEVSRS TDLVGGGNTK HLMDAVNSLP ELTDRKQVID KHTNIATFLL GQIKERSLDV YTTKEKAMMM
301: GGARINLTVE LALREAEADT SAFQYLKKIK SLNVSLAASS SANSASRSNI VDWAGMLYDQ
101: FHVLETLGVV PVIRCPVGGA AEMVAVSLDT KLRHHLRLLS KNNNLMTTRP LLCIFDRNFD LAVGIQHDFR CRPLVHDLLG LKLNGLVIPG AQKKKILFLD
201: TSSSDPFWSS NASLEFPQVA SEIEAHLNKY KEDVEEVSRS TDLVGGGNTK HLMDAVNSLP ELTDRKQVID KHTNIATFLL GQIKERSLDV YTTKEKAMMM
301: GGARINLTVE LALREAEADT SAFQYLKKIK SLNVSLAASS SANSASRSNI VDWAGMLYDQ
001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
Arabidopsis Description
SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.