Factsheet for HORVU5Hr1G009740.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G045800.1	Wheat	plastid	95.63	98.87
TraesCS5A01G038500.1	Wheat	cytosol, mitochondrion	95.79	98.71
TraesCS5B01G039900.1	Wheat	cytosol, mitochondrion	95.48	98.71
Os03t0620800-01	Rice	plasma membrane	83.31	85.71
OQU91892	Sorghum	cytosol, mitochondrion	83.0	85.26
Zm00001d030527_P001	Maize	cytosol, mitochondrion	81.59	84.22
Zm00001d005839_P001	Maize	cytosol, golgi, plastid	54.13	71.25
GSMUA_Achr3P26940_001	Banana	cytosol	60.37	68.37
CDY52164	Canola	cytosol	5.62	66.67
Solyc01g112150.2.1	Tomato	plastid	64.12	66.29
PGSC0003DMT400038058	Potato	cytosol	63.96	66.13
VIT_03s0038g03110.t01	Wine grape	cytosol	61.0	65.82
AT4G31740.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.47	65.5
KRH58359	Soybean	endoplasmic reticulum	63.18	65.11
KRH42240	Soybean	endoplasmic reticulum, nucleus	63.18	65.11
CDY63506	Canola	cytosol	59.75	63.62
CDY29213	Canola	cytosol	59.59	63.46
AT2G17980.1	Thale cress	mitochondrion	61.78	63.16
Bra024484.1-P	Field mustard	cytosol	61.78	62.17
PGSC0003DMT400043339	Potato	cytosol	30.89	60.37
CDY52165	Canola	cytosol	31.36	55.83
CDY39875	Canola	cytosol	27.77	54.43
Bra032934.1-P	Field mustard	cytosol	25.27	52.09
CDY48989	Canola	cytosol	24.96	51.95
HORVU6Hr1G043520.1	Barley	cytosol	3.43	28.21
HORVU6Hr1G043390.4	Barley	cytosol	18.41	19.73
HORVU2Hr1G062800.7	Barley	cytosol, plastid	17.78	18.15
HORVU3Hr1G117280.1	Barley	cytosol	17.32	16.37
HORVU2Hr1G011610.5	Barley	plastid	17.94	16.06
HORVU6Hr1G043530.1	Barley	cytosol	1.25	13.79

Protein Annotations

Gene3D:1.25.40.60	Gene3D:3.40.50.1910	Gene3D:3.40.50.2060	Gene3D:3.90.830.10	MapMan:35.1	UniProt:A0A287QB46
ncoils:Coil	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009987	GO:GO:0016192
EnsemblPlantsGene:HORVU5Hr1G009740	EnsemblPlants:HORVU5Hr1G009740.2	InterPro:IPR027482	PFAM:PF00995	PIRSF:PIRSF005715	PANTHER:PTHR11679
PANTHER:PTHR11679:SF60	SUPFAM:SSF56815	InterPro:Sec-1-like_dom2	InterPro:Sec1-like	InterPro:Sec1-like_sf	UniParc:UPI000B46C15B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:23918008..23920438

Molecular Weight (calculated)

69315.7 Da

IEP (calculated)

6.338

GRAVY (calculated)

-0.146

Length

641 amino acids

Sequence
(BLAST)

001: XXXXHLPSQI RSAAVVAGRS TAMALSLRKK QLDLITRMLH LNQQQPSSDG GGEGDEEAYK ILVMDGACIS LLSPVLRVGD LRKHGVTLHL NIDKARQQVA
101: DAPAVYLVRP TPANADRIAA DAAAGLYASF HVNFSTSVPR PVLDRLAAAT AASRSAHRVA RVADQYLDFV CLEDGLFSLA QPRAYVALND PAAADSDITA
201: LVEAVALGLF CVVATLGAVP IIRCARGGPA EMVAAALDAR LRDHLLAKPN LFTEAASSAA SSFQRPVLCL FDRNFELSVG IQHDWSYRPL VHDVLSFKLN
301: KLRLPTEKYD LDDSDPFWVA NSWSPFPKVA EEIEAQLAKY KQDVDEVNQR TGGGRDGVEF DGTDLIGNTK HLMNAVNSLP ELTERKKMID KHTNIATALL
401: GHIKERSLDG YYECENDMLV NGTVDRNMLL SLLRGKGTKE DKLRLAVTYL LSFEAPLASE LEQVEAALRE SEVDMSAFQY VKRIKSLNTQ FAAASSTASR
501: SNIVDWAEKL YGQSISAVTA GVKNLLSDGR QLALTRTVEA LMEGKPNPEV DNYLLFDPRA PRSGTGGQFR GPFREAIVFM IGGGNYIEYR SLVELGQRSQ
601: PSKHVIYGAT EILNGVEFIQ QLAELGQKAG LGGGSSNLPQ Q

Best Arabidopsis Sequence Match ( AT2G17980.1 )
(BLAST)

001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH

Arabidopsis Description

SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.