Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT2G17980.1 | Thale cress | mitochondrion | 81.29 | 22.17 |
KRH58359 | Soybean | endoplasmic reticulum | 75.44 | 20.74 |
KRH42240 | Soybean | endoplasmic reticulum, nucleus | 73.68 | 20.26 |
Solyc01g112150.2.1 | Tomato | plastid | 71.93 | 19.84 |
PGSC0003DMT400038058 | Potato | cytosol | 71.93 | 19.84 |
VIT_03s0038g03110.t01 | Wine grape | cytosol | 67.84 | 19.53 |
EES06083 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 66.67 | 18.21 |
GSMUA_Achr3P26940_001 | Banana | cytosol | 60.23 | 18.2 |
TraesCS5D01G045800.1 | Wheat | plastid | 65.5 | 18.06 |
TraesCS5B01G039900.1 | Wheat | cytosol, mitochondrion | 65.5 | 18.06 |
TraesCS5A01G038500.1 | Wheat | cytosol, mitochondrion | 65.5 | 18.01 |
Zm00001d051824_P001 | Maize | plasma membrane | 65.5 | 17.83 |
HORVU5Hr1G009740.2 | Barley | cytosol, mitochondrion | 65.5 | 17.47 |
OQU91892 | Sorghum | cytosol, mitochondrion | 63.74 | 17.47 |
Os03t0620800-01 | Rice | plasma membrane | 62.57 | 17.18 |
Zm00001d030527_P001 | Maize | cytosol, mitochondrion | 61.99 | 17.07 |
Zm00001d005839_P001 | Maize | cytosol, golgi, plastid | 36.26 | 12.73 |
AT1G77140.1 | Thale cress | cytosol | 16.96 | 5.1 |
AT1G12360.1 | Thale cress | cytosol | 17.54 | 4.5 |
CDY48989 | Canola | cytosol | 7.6 | 4.22 |
Bra032934.1-P | Field mustard | cytosol | 7.6 | 4.18 |
AT4G12120.1 | Thale cress | cytosol | 15.79 | 4.08 |
AT1G02010.4 | Thale cress | cytosol, nucleus, peroxisome | 16.37 | 3.98 |
PGSC0003DMT400043339 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
Gene3D:3.40.50.1910 | MapMan:35.1 | EntrezGene:829302 | ProteinID:AEE85952.1 | ArrayExpress:AT4G31740 | EnsemblPlantsGene:AT4G31740 |
RefSeq:AT4G31740 | TAIR:AT4G31740 | RefSeq:AT4G31740-TAIR-G | EnsemblPlants:AT4G31740.1 | TAIR:AT4G31740.1 | ProteinID:CAA19749.1 |
ProteinID:CAB79892.1 | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016192 |
InterPro:IPR027482 | RefSeq:NP_194902.1 | UniProt:O81774 | PFAM:PF00995 | PANTHER:PTHR11679 | PANTHER:PTHR11679:SF60 |
SUPFAM:SSF56815 | InterPro:Sec-1-like_dom2 | InterPro:Sec1-like | InterPro:Sec1-like_sf | UniParc:UPI00000A8455 | : |
Description
Sec1/munc18-like (SM) proteins superfamily [Source:UniProtKB/TrEMBL;Acc:O81774]
Coordinates
chr4:+:15363778..15364349
Molecular Weight (calculated)
18626.1 Da
IEP (calculated)
4.124
GRAVY (calculated)
-0.158
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKLRFAIMY LLSLETINQS EVEAVEAALP SADSASRSNI VDWAEKLYGQ SISAVTPGVK NLLSSDQQLP VARTVEALTD GKPNPETDSY LILDARASKS
101: GSIDNSYVKG PFEEAIVFMI GGGNYIEYSS LQELSQRQEM VNNIIYGATE ILTGTELVEQ LGELGQKMGL R
101: GSIDNSYVKG PFEEAIVFMI GGGNYIEYSS LQELSQRQEM VNNIIYGATE ILTGTELVEQ LGELGQKMGL R
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.