Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032934.1-P | Field mustard | cytosol | 95.78 | 94.86 |
| CDY52165 | Canola | cytosol | 72.08 | 61.67 |
| PGSC0003DMT400043339 | Potato | cytosol | 36.36 | 34.15 |
| VIT_03s0038g03110.t01 | Wine grape | cytosol | 59.09 | 30.64 |
| CDY63506 | Canola | cytosol | 59.42 | 30.4 |
| CDY29213 | Canola | cytosol | 59.42 | 30.4 |
| Zm00001d005839_P001 | Maize | cytosol, golgi, plastid | 47.4 | 29.98 |
| KRH58359 | Soybean | endoplasmic reticulum | 60.06 | 29.74 |
| PGSC0003DMT400038058 | Potato | cytosol | 59.42 | 29.52 |
| KRH42240 | Soybean | endoplasmic reticulum, nucleus | 59.42 | 29.42 |
| Solyc01g112150.2.1 | Tomato | plastid | 59.09 | 29.35 |
| EES06083 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 53.57 | 26.36 |
| TraesCS5D01G045800.1 | Wheat | plastid | 51.95 | 25.81 |
| TraesCS5B01G039900.1 | Wheat | cytosol, mitochondrion | 51.95 | 25.81 |
| Zm00001d051824_P001 | Maize | plasma membrane | 52.6 | 25.8 |
| TraesCS5A01G038500.1 | Wheat | cytosol, mitochondrion | 51.95 | 25.72 |
| Os03t0620800-01 | Rice | plasma membrane | 51.3 | 25.36 |
| OQU91892 | Sorghum | cytosol, mitochondrion | 50.97 | 25.16 |
| HORVU5Hr1G009740.2 | Barley | cytosol, mitochondrion | 51.95 | 24.96 |
| Zm00001d030527_P001 | Maize | cytosol, mitochondrion | 50.32 | 24.96 |
| GSMUA_Achr3P26940_001 | Banana | cytosol | 45.78 | 24.91 |
| CDX79223 | Canola | cytosol, plastid | 4.22 | 19.7 |
| CDY39875 | Canola | cytosol | 16.56 | 15.6 |
| CDY70457 | Canola | cytosol | 16.56 | 14.25 |
| CDX79215 | Canola | cytosol | 15.26 | 11.35 |
| CDX79222 | Canola | cytosol, mitochondrion | 9.09 | 10.33 |
| CDY38360 | Canola | cytosol | 18.51 | 10.02 |
| CDY71507 | Canola | cytosol, golgi | 8.12 | 8.42 |
| CDX86721 | Canola | cytosol | 16.88 | 7.89 |
| CDY13575 | Canola | cytosol | 14.61 | 7.85 |
| CDY30074 | Canola | cytosol | 16.88 | 7.78 |
| CDX98070 | Canola | cytosol | 16.56 | 7.67 |
| CDY26559 | Canola | cytosol | 16.56 | 7.66 |
| CDY15993 | Canola | cytosol | 16.56 | 7.65 |
| AT4G31740.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 4.22 | 7.6 |
| CDY38041 | Canola | nucleus | 16.23 | 7.41 |
| CDX90817 | Canola | cytosol | 15.91 | 7.32 |
| CDY68111 | Canola | cytosol | 15.91 | 7.32 |
| CDX94488 | Canola | cytosol | 15.26 | 7.07 |
| CDX79189 | Canola | cytosol | 5.84 | 6.55 |
| CDY26558 | Canola | cytosol | 1.95 | 3.77 |
| CDY49318 | Canola | plastid | 0.32 | 0.82 |
| CDY52164 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.1910 | Gene3D:3.90.830.10 | MapMan:35.1 | GO:A0A078IHV3 | UniProt:A0A078IHV3 | EnsemblPlants:CDY48989 |
| ProteinID:CDY48989 | ProteinID:CDY48989.1 | ncoils:Coil | GO:GO:0006810 | GO:GO:0006904 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016192 | EnsemblPlantsGene:GSBRNA2T00092190001 | InterPro:IPR027482 | PFAM:PF00995 | PANTHER:PTHR11679 |
| PANTHER:PTHR11679:SF60 | SUPFAM:SSF56815 | InterPro:Sec-1-like_dom2 | InterPro:Sec1-like | InterPro:Sec1-like_sf | UniParc:UPI0004EEA73A |
Description
BnaA02g28070DBnaA02g28070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHV3]
Coordinates
chrLK032805:-:75005..76574
Molecular Weight (calculated)
34165.0 Da
IEP (calculated)
6.003
GRAVY (calculated)
-0.093
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSNFADLLF INKDVTWTLH HSCSIESVHD HHLEFVALED NLFSLSQHSV YAQMNYPSAT ATGGGDVEEM VEKIADGLFH VLATLGVVPV IRCPVGGAAE
101: MVAVSLDTKL RHHLRLLNFD LAVGIQHDFR YRPLVHDLLG LKLNGLVIPG AQKKKIFLDT SSSDPFWSSA NTSLEFPQVA SEIEAHLNKY KQDVEEVSRS
201: TDLIGGGNTK HLMDSVNSLP DLTDRKQVID IDKHTNIATF LLGQIKERSL DVYTTKENAM MMGGARINLS DLPSVLKSKG TKMDKLRFAI IYLLSLDTPD
301: LEANKENI
101: MVAVSLDTKL RHHLRLLNFD LAVGIQHDFR YRPLVHDLLG LKLNGLVIPG AQKKKIFLDT SSSDPFWSSA NTSLEFPQVA SEIEAHLNKY KQDVEEVSRS
201: TDLIGGGNTK HLMDSVNSLP DLTDRKQVID IDKHTNIATF LLGQIKERSL DVYTTKENAM MMGGARINLS DLPSVLKSKG TKMDKLRFAI IYLLSLDTPD
301: LEANKENI
001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH
Arabidopsis Description
SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.