CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX69988
CDX73442
CDX73851	plasma membrane
CDX78314
CDX81075
CDX93553
CDX95050
CDX97497
CDX99033
CDY01061	plasma membrane
CDY02165
CDY08492	plasma membrane
CDY23079
CDY31137
CDY42860
CDY47025
CDY70958	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12360.1	CDX93553	AT1G08560.1	11157980
AT1G12360.1	CDX95050	AT1G08560.1	11157980
AT1G12360.1	CDX97497	AT1G08560.1	11157980
AT1G12360.1	CDY31137	AT1G08560.1	11157980
AT1G12360.1	CDX73851	AT3G11820.1	23572542
AT1G12360.1	CDY01061	AT3G11820.1	23572542
AT1G12360.1	CDY08492	AT3G11820.1	23572542
AT1G12360.1	CDY70958	AT3G11820.1	23572542
AT1G12360.1	CDX73851	AT3G11820.1	23572542
AT1G12360.1	CDY01061	AT3G11820.1	23572542
AT1G12360.1	CDY08492	AT3G11820.1	23572542
AT1G12360.1	CDY70958	AT3G11820.1	23572542
AT1G12360.1	CDX69988	AT5G07880.1	11591731
AT1G12360.1	CDX73442	AT5G07880.1	11591731
AT1G12360.1	CDX78314	AT5G07880.1	11591731
AT1G12360.1	CDX81075	AT5G07880.1	11591731
AT1G12360.1	CDX99033	AT5G07880.1	11591731
AT1G12360.1	CDY02165	AT5G61210.1	11591731
AT1G12360.1	CDY23079	AT5G61210.1	11591731
AT1G12360.1	CDY42860	AT5G61210.1	11591731
AT1G12360.1	CDY47025	AT5G61210.1	11591731

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26559	Canola	cytosol	99.25	99.4
CDY26558	Canola	cytosol	23.69	99.37
AT1G12360.1	Thale cress	cytosol	96.55	96.7
CDX98070	Canola	cytosol	95.35	95.64
CDY30074	Canola	cytosol	95.65	95.51
VIT_13s0019g05000.t01	Wine grape	cytosol	79.46	79.7
KRH57307	Soybean	cytosol, nucleus	77.81	78.05
Solyc08g079520.2.1	Tomato	nucleus	77.51	77.63
Os02t0452500-01	Rice	cytosol, plasma membrane	13.34	77.39
KRH28021	Soybean	nucleus	76.91	77.38
KRH04038	Soybean	cytosol	76.76	76.88
KRH77416	Soybean	cytosol	75.41	74.08
CDX86721	Canola	cytosol	66.87	67.68
CDY68111	Canola	cytosol	67.47	67.26
CDX94488	Canola	cytosol	66.72	66.92
CDX90817	Canola	cytosol	67.02	66.82
CDY38041	Canola	nucleus	65.07	64.3
CDY49318	Canola	plastid	9.6	52.46
CDY70457	Canola	cytosol	12.44	23.18
CDY52164	Canola	cytosol	1.8	22.22
CDY38360	Canola	cytosol	18.44	21.62
CDY39875	Canola	cytosol	10.49	21.41
CDX79215	Canola	cytosol	12.59	20.29
CDY13575	Canola	cytosol	17.09	19.9
CDY29213	Canola	cytosol	17.84	19.77
CDX79223	Canola	cytosol, plastid	1.95	19.7
CDX79189	Canola	cytosol	8.1	19.64
CDY63506	Canola	cytosol	17.69	19.6
CDX79222	Canola	cytosol, mitochondrion	7.2	17.71
CDY48989	Canola	cytosol	7.65	16.56
CDY52165	Canola	cytosol	8.85	16.39
CDY71507	Canola	cytosol, golgi	5.4	12.12

Protein Annotations

EnsemblPlants:CDY15993	EnsemblPlantsGene:GSBRNA2T00090378001	Gene3D:3.40.50.2060	GO:A0A078FUE7	GO:GO:0006810	GO:GO:0006904
GO:GO:0008150	GO:GO:0009987	GO:GO:0016192	InterPro:Sec1-like	InterPro:Sec1-like_sf	PANTHER:PTHR11679
PANTHER:PTHR11679:SF59	PFAM:PF00995	PIRSF:PIRSF005715	ProteinID:CDY15993	ProteinID:CDY15993.1	SEG:seg
SUPFAM:SSF56815	UniParc:UPI0004EC31D5	UniProt:A0A078FUE7	MapMan:13.4.2.4	:	:

Description

BnaC08g41300DBnaC08g41300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUE7]

Coordinates

chrLK032060:+:133311..138390

Molecular Weight (calculated)

75343.6 Da

IEP (calculated)

8.433

GRAVY (calculated)

-0.457

Length

667 amino acids

Sequence
(BLAST)

001: MSYSDSDSSS QAADYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI
101: MFLSDMSGKS PLYKKAFVFF SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK GDACLNVMAS RIATVFASLR
201: EFPTVRYRAA KSLDASTMTT MRDLIPTKLA AGIWNCLAKH KQSIENFPQT ETCELLILDR SIDQIAPIIH EWTYDAMCHD LLNMDGNKYV HVIPSKSGGQ
301: PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQHGK RDGGELSTRD LQKMVQALPQ YSEQIDKLSL HVEIARKIND LIREQGLREL
401: GQLEQDLVFG DAGMKDVIKY LSTQEEASRE GKLRLLMILA TIYPEKFEGE KGQNLMKLAK LPSDDMSAVN NMRLLGSAVD AKKNTPGGFT LKFDLHKKKR
501: AVRKERQEEA AWQLSRFYPM VEELIEKLSK GELPKEDYPC MNDPSPSFHG STSLSSSASS NQGQAAAQSM RSRRTPTWAK PRGSDDGYSS DSVLRHASSD
601: FRKMGQRIFV FIVGGATRSE LKVCHKLTTK LKREVILGST SLDDPPQFIT KLKLLSANEL SIDDLQI

Best Arabidopsis Sequence Match ( AT1G12360.1 )
(BLAST)

001: MSYSDSDSSS HGGEYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI
101: MFLSDMSGKS PLYKKAFVFF SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK GDACLNVMAS RIATVFASLR
201: EFPAVRYRAA KSLDASTMTT LRDLIPTKLA AGIWNCLAKH KQSIENFPQT ETCELLILDR SIDQIAPVIH EWTYDAMCHD LLNMEGNKYV HVIPSKSGGQ
301: PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQGKR DGAELSTRDL QKMVQALPQY SEQIDKLSLH VEIARKLNDL IREQGLRELG
401: QLEQDLVFGD AGMKDVIKYL STQEEASREG KLRLLMILAT IYPEKFEGEK GQNLMKLAKL SSDDMTAVNN MSLLGSAVDA KKNTPGGFTL KFDLHKKKRA
501: VRKERQEEAA WQLSRFYPMI EELIEKLSKG ELPKEDFPCM NDPSPSFHGS TSLSSAASSS QGQAAQSMRS RRTPTWAKPR GSDDGYSSDS VLRHASSDFR
601: KMGQRIFVFI VGGATRSELK VCHKLSTKLK REVILGSTSL DDPPQFITKL KLLTANDDLS LDDLQI

Arabidopsis Description

KEUSNARE-interacting protein KEULE [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.