Factsheet for Bra024484.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
golgi 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29213	Canola	cytosol	94.51	100.0
AT2G17980.1	Thale cress	mitochondrion	89.01	90.43
VIT_03s0038g03110.t01	Wine grape	cytosol	75.67	81.14
PGSC0003DMT400038058	Potato	cytosol	78.81	80.97
PGSC0003DMT400043339	Potato	cytosol	41.6	80.79
Solyc01g112150.2.1	Tomato	plastid	78.02	80.16
KRH58359	Soybean	endoplasmic reticulum	78.18	80.06
KRH42240	Soybean	endoplasmic reticulum, nucleus	77.39	79.26
GSMUA_Achr3P26940_001	Banana	cytosol	60.75	68.37
EES06083	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	63.27	64.38
TraesCS5D01G045800.1	Wheat	plastid	62.01	63.71
TraesCS5B01G039900.1	Wheat	cytosol, mitochondrion	62.01	63.71
TraesCS5A01G038500.1	Wheat	cytosol, mitochondrion	62.01	63.5
Zm00001d051824_P001	Maize	plasma membrane	62.01	62.9
Os03t0620800-01	Rice	plasma membrane	60.75	62.12
HORVU5Hr1G009740.2	Barley	cytosol, mitochondrion	62.17	61.78
OQU91892	Sorghum	cytosol, mitochondrion	60.28	61.54
Zm00001d030527_P001	Maize	cytosol, mitochondrion	58.87	60.39
Bra032934.1-P	Field mustard	cytosol	29.36	60.13
Zm00001d005839_P001	Maize	cytosol, golgi, plastid	40.03	52.36
Bra008294.1-P	Field mustard	cytosol	17.58	19.68
Bra029438.1-P	Field mustard	cytosol	19.15	18.51
Bra019760.1-P	Field mustard	cytosol	18.05	18.03
Bra026974.1-P	Field mustard	cytosol	18.84	18.02
Bra000761.1-P	Field mustard	cytosol	17.9	16.81
Bra032660.1-P	Field mustard	cytosol	15.54	16.61
Bra038812.1-P	Field mustard	plastid	2.67	13.28

Protein Annotations

Gene3D:1.25.40.60	Gene3D:3.40.50.1910	Gene3D:3.40.50.2060	Gene3D:3.90.830.10	MapMan:35.1	EnsemblPlantsGene:Bra024484
EnsemblPlants:Bra024484.1	EnsemblPlants:Bra024484.1-P	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006810	GO:GO:0006904	GO:GO:0008150	GO:GO:0009987
GO:GO:0016192	InterPro:IPR027482	UniProt:M4E6S9	PFAM:PF00995	PIRSF:PIRSF005715	PANTHER:PTHR11679
PANTHER:PTHR11679:SF60	SUPFAM:SSF56815	InterPro:Sec-1-like_dom2	InterPro:Sec1-like	InterPro:Sec1-like_sf	UniParc:UPI000253EF9A
SEG:seg	:	:	:	:	:

Description

AT2G17980 (E=8e-162) ATSLY1 | ATSLY1; protein transporter

Coordinates

chrA06:-:16105098..16107244

Molecular Weight (calculated)

70178.2 Da

IEP (calculated)

6.801

GRAVY (calculated)

-0.248

Length

637 amino acids

Sequence
(BLAST)

001: MALNLRQKQT ECIIRMLNLN QPLKQSGTAN EEVYKILIYD KFCQNILSPL IHVKDLRKHG VTLYFLIDKD RKTVRDVPAV YFVQPTHSNI HRIISDASQA
101: LYDTFHLNFS SSIPRPLLED LASGTLKSGS VEKVSKVYDQ YLEFVTLEDN LFSLAQQNTY VQLNDPKAVE KDIEAIIERV VNGLFCVLVT LGVVPVIRCP
201: SGGGPAEMVA SLLDQKLRDH LLSKNNMFAE GGGFMSSFQR PLLCIFDRNF ELSVGIQHDF RYRPLVHDVL GLKLNRLNVQ GEKGGMKSFE LDSSDPFWSA
301: NSSLEFPEVA GGGETQLNKY KRDVEIETQL NKYKRDVEEV NKRTGGGSGA EFDGTDLIGN TKHLMNAVNS LPELTERKQV IDKHTNIATA LLGQIKERSI
401: DAFTKKESDM MMRGGIDRAE LMAALKGKGT KMDKLRFAIM YLISTETINQ SEVESVEAAL NEAGADTSAF QYVKKIKSLN VSLAASANSA SRSNIVDWAE
501: KLYGQSISAV TAGVKNLLSS DQQLAVTRTV EALTEGKPNP EFDSYLLLDP RAPKPSSGGG SHVKGPFREA MVFMIGGGNY VEYGSLQELT QRQLTVKNVI
601: YGATEILTGS ELVEQLGLLG KKMGLGGPVA SSSSSGH

Best Arabidopsis Sequence Match ( AT2G17980.1 )
(BLAST)

001: MALNLRQKQT ECVIRMLNLN QPLNPSGTAN EEVYKILIYD RFCQNILSPL THVKDLRKHG VTLFFLIDKD RQPVHDVPAV YFVQPTESNL QRIIADASRS
101: LYDTFHLNFS SSIPRKFLEE LASGTLKSGS VEKVSKVHDQ YLEFVTLEDN LFSLAQQSTY VQMNDPSAGE KEINEIIERV ASGLFCVLVT LGVVPVIRCP
201: SGGPAEMVAS LLDQKLRDHL LSKNNLFTEG GGFMSSFQRP LLCIFDRNFE LSVGIQHDFR YRPLVHDVLG LKLNQLKVQG EKGPPKSFEL DSSDPFWSAN
301: STLEFPDVAV EIETQLNKYK RDVEEVNKKT GGGSGAEFDG TDLIGNIHTE HLMNTVKSLP ELTERKKVID KHTNIATALL GQIKERSIDA FTKKESDMMM
401: RGGIDRTELM AALKGKGTKM DKLRFAIMYL ISTETINQSE VEAVEAALNE AEADTSAFQY VKKIKSLNAS FAATSANSAS RSNIVDWAEK LYGQSISAVT
501: AGVKNLLSSD QQLAVTRTVE ALTEGKPNPE IDSYRFLDPR APKSSSSGGS HVKGPFREAI VFMIGGGNYV EYGSLQELTQ RQLTVKNVIY GATEILNGGE
601: LVEQLGLLGK KMGLGGPVAS TSLSGGH

Arabidopsis Description

SLY1SEC1 family transport protein SLY1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL48]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.