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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004159_P003 Maize cytosol, plastid 93.4 92.71
OQU84878 Sorghum nucleus 84.71 85.48
TraesCS2B01G074400.1 Wheat nucleus 83.36 83.48
TraesCS2D01G060000.1 Wheat nucleus 83.36 83.36
TraesCS2A01G061000.1 Wheat nucleus 83.06 82.93
Os04t0252400-01 Rice plasma membrane 15.89 80.92
GSMUA_Achr7P16520_001 Banana cytosol 76.76 76.65
GSMUA_Achr7P16530_001 Banana nucleus 76.16 76.39
HORVU2Hr1G011610.5 Barley plastid 81.71 76.12
KXG19223 Sorghum cytosol 62.97 64.22
EES13788 Sorghum cytosol 17.69 20.81
EES06083 Sorghum cytosol, endoplasmic reticulum, mitochondrion, plastid 19.49 20.77
OQU91892 Sorghum cytosol, mitochondrion 18.29 19.55
Protein Annotations
Gene3D:1.25.40.60MapMan:13.4.2.4Gene3D:3.40.50.1910Gene3D:3.40.50.2060Gene3D:3.90.830.10UniProt:A0A1B6PJT7
GO:GO:0006810GO:GO:0006904GO:GO:0008150GO:GO:0009987GO:GO:0016192InterPro:IPR027482
EnsemblPlants:KXG25933ProteinID:KXG25933ProteinID:KXG25933.1PFAM:PF00995PIRSF:PIRSF005715PANTHER:PTHR11679
PANTHER:PTHR11679:SF42EnsemblPlantsGene:SORBI_3006G033200SUPFAM:SSF56815InterPro:Sec-1-like_dom2InterPro:Sec1-likeInterPro:Sec1-like_sf
UniParc:UPI0003C6CF20SEG:seg::::
Description
hypothetical protein
Coordinates
chr6:+:8035812..8049585
Molecular Weight (calculated)
75677.9 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.433
Length
667 amino acids
Sequence
(BLAST)
001: MSIDSDSSSQ SGADYRSFRQ ITRDRLLVEM LRSTRKSSKS TWKVLIMDKL TVKIMSFSCK MADITEEGVS LVEDLYKRRQ PLPSMDAIYF MQPTKENVRI
101: FMSDMSGKNS LYKKAYVFFS SPVQRELVAH IKKDSTVLTR ISALSEMNLE YFAIDSQGFI TDHDKALEEL FSEDAEGSHK YNACLNTMAT RIATVFASLR
201: EFPRVHYRVA RTIDASTLTT LRDLVPTKLA ASVWNSLARY KSTIPEFPQT ETCELLIVDR SIDQIAPIIH EWTYDAMCHD LLYMDGNKYV QEVPSKNGSA
301: NEKKEVLLED HDPVWLELRH AHIADANERL YEKMTSFVSK NKAAQLQQAR SGGELSTKQL QKMVQALPQY SDQIDKLTLH VEIAGKLNNI IKEQHLKDVG
401: QLEQDLVFGD AGTKELISFL RTRMDVSREN KLRLLMIYAS INPEKFFESD KGAKLMQLAG LSADDMIVVN NMRCLRGPDT KKSSVGAFTL KFDLQKKKPG
501: IRKERVGEES TWMLSRFYPI LEDLIEKLSK GELPKDEYHC MNDPSPSFRG IPGSTSARTS PAHQPAQSMR SRRIGGTWAR PRNSDDGYSS DSVLKHASSD
601: LRKLGPRLFI FVIGGATRSE LRVAHKLSSK LKREIILGSS SLDDPPQFIT KLKMLSTEEL SLDDLQI
Best Arabidopsis Sequence Match ( AT1G12360.1 )
(BLAST)
001: MSYSDSDSSS HGGEYKNFRQ ITRERLLYEM LRSAKTGSSK STWKVLIMDK LTVKIMSYAC KMADITQEGV SLVEDIFRRR QPLPSMDAIY FIQPTKENVI
101: MFLSDMSGKS PLYKKAFVFF SSPVSKELVG HIKKDSSVLP RIGALREMNL EFFAIDSQGF ITDHERALED LFGDEETSRK GDACLNVMAS RIATVFASLR
201: EFPAVRYRAA KSLDASTMTT LRDLIPTKLA AGIWNCLAKH KQSIENFPQT ETCELLILDR SIDQIAPVIH EWTYDAMCHD LLNMEGNKYV HVIPSKSGGQ
301: PEKKDVLLEE HDPIWLELRH AHIADASERL HDKMTNFLSK NKAAQLQGKR DGAELSTRDL QKMVQALPQY SEQIDKLSLH VEIARKLNDL IREQGLRELG
401: QLEQDLVFGD AGMKDVIKYL STQEEASREG KLRLLMILAT IYPEKFEGEK GQNLMKLAKL SSDDMTAVNN MSLLGSAVDA KKNTPGGFTL KFDLHKKKRA
501: VRKERQEEAA WQLSRFYPMI EELIEKLSKG ELPKEDFPCM NDPSPSFHGS TSLSSAASSS QGQAAQSMRS RRTPTWAKPR GSDDGYSSDS VLRHASSDFR
601: KMGQRIFVFI VGGATRSELK VCHKLSTKLK REVILGSTSL DDPPQFITKL KLLTANDDLS LDDLQI
Arabidopsis Description
KEUSNARE-interacting protein KEULE [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.