Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03569 | Soybean | cytosol, nucleus | 94.34 | 94.34 |
| KRH20240 | Soybean | nucleus | 93.71 | 93.71 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 93.71 | 93.12 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 93.71 | 93.12 |
| KRH75732 | Soybean | cytosol, plastid | 67.3 | 90.68 |
| GSMUA_Achr6P35270_001 | Banana | cytosol | 89.94 | 89.94 |
| GSMUA_Achr7P20890_001 | Banana | cytosol | 70.44 | 89.6 |
| Solyc12g042080.1.1 | Tomato | nucleus | 89.31 | 89.31 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 88.68 | 88.68 |
| Solyc06g073790.2.1 | Tomato | cytosol | 88.68 | 88.68 |
| PGSC0003DMT400015118 | Potato | cytosol | 86.79 | 88.46 |
| Bra009706.1-P | Field mustard | cytosol | 88.05 | 88.05 |
| Bra029381.1-P | Field mustard | cytosol | 87.42 | 87.42 |
| Bra026484.1-P | Field mustard | cytosol | 87.42 | 87.42 |
| CDX87158 | Canola | cytosol | 87.42 | 87.42 |
| CDY69343 | Canola | cytosol | 87.42 | 87.42 |
| CDY16867 | Canola | cytosol | 87.42 | 87.42 |
| CDY46968 | Canola | cytosol | 87.42 | 87.42 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 96.86 | 87.01 |
| GSMUA_Achr6P22460_001 | Banana | cytosol | 87.42 | 86.88 |
| PGSC0003DMT400013305 | Potato | cytosol | 86.79 | 86.79 |
| CDX83060 | Canola | cytosol | 86.79 | 86.79 |
| Bra029928.1-P | Field mustard | cytosol | 86.79 | 86.79 |
| EES12457 | Sorghum | cytosol | 86.79 | 86.25 |
| AT3G48930.1 | Thale cress | cytosol | 86.79 | 86.25 |
| AT5G23740.1 | Thale cress | cytosol | 86.16 | 86.16 |
| AT4G30800.1 | Thale cress | cytosol | 86.16 | 86.16 |
| CDY64707 | Canola | cytosol | 85.53 | 85.53 |
| CDY05882 | Canola | cytosol | 85.53 | 85.53 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 85.53 | 85.0 |
| OQU85305 | Sorghum | cytosol | 85.53 | 85.0 |
| Zm00001d003118_P001 | Maize | cytosol | 83.65 | 84.71 |
| TraesCS6D01G203900.1 | Wheat | cytosol | 84.91 | 83.85 |
| GSMUA_Achr4P20370_001 | Banana | cytosol | 60.38 | 83.48 |
| TraesCS6A01G231200.1 | Wheat | cytosol | 83.65 | 82.61 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 51.57 | 81.19 |
| CDX96205 | Canola | cytosol | 71.07 | 77.4 |
| CDY44261 | Canola | cytosol | 85.53 | 76.84 |
| PGSC0003DMT400015117 | Potato | cytosol | 84.28 | 74.86 |
| HORVU6Hr1G056610.3 | Barley | mitochondrion | 83.02 | 71.74 |
| CDX88047 | Canola | vacuole | 88.05 | 67.96 |
| GSMUA_Achr9P09150_001 | Banana | cytosol | 59.12 | 67.63 |
| CDY64632 | Canola | extracellular | 86.16 | 59.57 |
| GSMUA_Achr3P13330_001 | Banana | plastid | 60.38 | 45.71 |
| CDX91453 | Canola | cytosol | 69.81 | 45.68 |
| Bra018026.1-P | Field mustard | cytosol | 77.36 | 43.93 |
| CDX80385 | Canola | cytosol | 88.05 | 36.08 |
Protein Annotations
| EntrezGene:100500094 | MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | EMBL:ACUP02005521 | EMBL:BT090818 | UniProt:C6T065 |
| EnsemblPlantsGene:GLYMA_09G094200 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 |
| EnsemblPlants:KRH37857 | ProteinID:KRH37857 | ProteinID:KRH37857.1 | InterPro:NA-bd_OB-fold | PFAM:PD001295 | PFAM:PF00366 |
| PFAM:PF16205 | PRINTS:PR00973 | ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF17 | InterPro:Ribosomal_S11_N |
| InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS | InterPro:Ribosomal_S17_arc-typ | SUPFAM:SSF50249 | TIGRFAMs:TIGR03630 | UniParc:UPI0001B152EF |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:13142052..13144638
Molecular Weight (calculated)
17785.0 Da
IEP (calculated)
11.257
GRAVY (calculated)
-0.516
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQTEKAFL KQPKVFLCSK KGGKGKRPGK GGNRFWKSIG LGFKTPRDAI EGTYIDKKCP FTGNVSIRGR ILAGTCHSAK MTRTIIVRRN YLHFIKKYQR
101: YEKRHSNIPA HTSPCFRVKE GDHVIIGQCR PISKTVRFNV LKVIPAGSSS GAKKAFTGM
101: YEKRHSNIPA HTSPCFRVKE GDHVIIGQCR PISKTVRFNV LKVIPAGSSS GAKKAFTGM
001: MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYIDSKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
Arabidopsis Description
RPS11CRPS11-BETA [Source:UniProtKB/TrEMBL;Acc:A0A178UPD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.