Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05882 | Canola | cytosol | 99.37 | 99.37 |
| CDX83060 | Canola | cytosol | 97.48 | 97.48 |
| CDX87000 | Canola | cytosol | 30.82 | 96.08 |
| CDY69343 | Canola | cytosol | 94.34 | 94.34 |
| CDX87158 | Canola | cytosol | 94.34 | 94.34 |
| CDY46968 | Canola | cytosol | 94.34 | 94.34 |
| CDY16867 | Canola | cytosol | 93.08 | 93.08 |
| AT3G48930.1 | Thale cress | cytosol | 91.19 | 90.62 |
| EES12457 | Sorghum | cytosol | 88.05 | 87.5 |
| OQU85305 | Sorghum | cytosol | 86.79 | 86.25 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 86.79 | 86.25 |
| KRH03569 | Soybean | cytosol, nucleus | 86.16 | 86.16 |
| KRH37857 | Soybean | cytosol | 85.53 | 85.53 |
| Solyc06g073790.2.1 | Tomato | cytosol | 85.53 | 85.53 |
| KRH20240 | Soybean | nucleus | 85.53 | 85.53 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 85.53 | 85.53 |
| Solyc12g042080.1.1 | Tomato | nucleus | 85.53 | 85.53 |
| Zm00001d003118_P001 | Maize | cytosol | 84.28 | 85.35 |
| PGSC0003DMT400015118 | Potato | cytosol | 83.65 | 85.26 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 85.53 | 85.0 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 84.28 | 83.75 |
| TraesCS6D01G203900.1 | Wheat | cytosol | 84.28 | 83.23 |
| CDY44261 | Canola | cytosol | 92.45 | 83.05 |
| KRH75732 | Soybean | cytosol, plastid | 61.64 | 83.05 |
| PGSC0003DMT400013305 | Potato | cytosol | 83.02 | 83.02 |
| CDX96205 | Canola | cytosol | 76.1 | 82.88 |
| TraesCS6A01G231200.1 | Wheat | cytosol | 83.02 | 81.99 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 49.69 | 78.22 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 83.02 | 74.58 |
| CDX88047 | Canola | vacuole | 93.71 | 72.33 |
| PGSC0003DMT400015117 | Potato | cytosol | 80.5 | 71.51 |
| HORVU6Hr1G056610.3 | Barley | mitochondrion | 81.76 | 70.65 |
| CDY64632 | Canola | extracellular | 97.48 | 67.39 |
| CDX86999 | Canola | mitochondrion | 30.19 | 53.93 |
| Bra018026.1-P | Field mustard | cytosol | 91.82 | 52.14 |
| CDX91453 | Canola | cytosol | 77.36 | 50.62 |
| CDX80385 | Canola | cytosol | 93.71 | 38.4 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | GO:A0A078JH15 | UniProt:A0A078JH15 | EnsemblPlants:CDY64707 | ProteinID:CDY64707 |
| ProteinID:CDY64707.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00042579001 | InterPro:NA-bd_OB-fold |
| PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 | ScanProsite:PS00056 | PANTHER:PTHR10744 |
| PANTHER:PTHR10744:SF17 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS | InterPro:Ribosomal_S17_arc-typ | SUPFAM:SSF50249 |
| TIGRFAMs:TIGR03630 | UniParc:UPI0004EEDB45 | SEG:seg | : | : | : |
Description
BnaA06g38660DBnaA06g38660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH15]
Coordinates
chrLK034526:+:541..1878
Molecular Weight (calculated)
17679.8 Da
IEP (calculated)
11.406
GRAVY (calculated)
-0.408
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFVKNIG LGFKTPREAT QGTYIDSKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FAKKAFTGA
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FAKKAFTGA
001: MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYIDSKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
Arabidopsis Description
RPS11CRPS11-BETA [Source:UniProtKB/TrEMBL;Acc:A0A178UPD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.