Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
- cytosol 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026484.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX87158 | Canola | cytosol | 100.0 | 100.0 |
| CDY46968 | Canola | cytosol | 98.74 | 98.74 |
| CDY16867 | Canola | cytosol | 97.48 | 97.48 |
| CDX83060 | Canola | cytosol | 96.23 | 96.23 |
| CDX87000 | Canola | cytosol | 30.82 | 96.08 |
| AT5G23740.1 | Thale cress | cytosol | 94.97 | 94.97 |
| CDY64707 | Canola | cytosol | 94.34 | 94.34 |
| CDY05882 | Canola | cytosol | 94.34 | 94.34 |
| KRH37857 | Soybean | cytosol | 87.42 | 87.42 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 87.42 | 86.88 |
| EES12457 | Sorghum | cytosol | 87.42 | 86.88 |
| KRH03569 | Soybean | cytosol, nucleus | 86.16 | 86.16 |
| CDY44261 | Canola | cytosol | 95.6 | 85.88 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 86.16 | 85.62 |
| OQU85305 | Sorghum | cytosol | 86.16 | 85.62 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 86.16 | 85.62 |
| KRH20240 | Soybean | nucleus | 85.53 | 85.53 |
| CDX96205 | Canola | cytosol | 77.99 | 84.93 |
| Zm00001d003118_P001 | Maize | cytosol | 83.65 | 84.71 |
| Solyc12g042080.1.1 | Tomato | nucleus | 84.28 | 84.28 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 84.28 | 84.28 |
| Solyc06g073790.2.1 | Tomato | cytosol | 84.28 | 84.28 |
| PGSC0003DMT400015118 | Potato | cytosol | 81.76 | 83.33 |
| KRH75732 | Soybean | cytosol, plastid | 61.64 | 83.05 |
| TraesCS6D01G203900.1 | Wheat | cytosol | 83.65 | 82.61 |
| PGSC0003DMT400013305 | Potato | cytosol | 81.76 | 81.76 |
| TraesCS6A01G231200.1 | Wheat | cytosol | 82.39 | 81.37 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 50.31 | 79.21 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 84.91 | 76.27 |
| CDX88047 | Canola | vacuole | 97.48 | 75.24 |
| HORVU6Hr1G056610.3 | Barley | mitochondrion | 81.76 | 70.65 |
| PGSC0003DMT400015117 | Potato | cytosol | 79.25 | 70.39 |
| CDY64632 | Canola | extracellular | 95.6 | 66.09 |
| CDX86999 | Canola | mitochondrion | 30.82 | 55.06 |
| CDX91453 | Canola | cytosol | 78.62 | 51.44 |
| CDX80385 | Canola | cytosol | 97.48 | 39.95 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | GO:A0A078JP62 | UniProt:A0A078JP62 | EnsemblPlants:CDY69343 | ProteinID:CDY69343 |
| ProteinID:CDY69343.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00087005001 | InterPro:NA-bd_OB-fold |
| PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 | ScanProsite:PS00056 | PANTHER:PTHR10744 |
| PANTHER:PTHR10744:SF17 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS | InterPro:Ribosomal_S17_arc-typ | SUPFAM:SSF50249 |
| TIGRFAMs:TIGR03630 | UniParc:UPI0001BA8D9D | SEG:seg | : | : | : |
Description
BnaAnng30090DBnaAnng30090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JP62]
Coordinates
chrLK039203:-:1456..2495
Molecular Weight (calculated)
17926.1 Da
IEP (calculated)
11.418
GRAVY (calculated)
-0.486
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LSFKTPRDAI DGTYIDRKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FAKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FAKKAFTGM
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYVDKKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRD YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
Arabidopsis Description
RPS11A40S ribosomal protein S11-1 [Source:UniProtKB/Swiss-Prot;Acc:P16181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.