Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G203900.1 | Wheat | cytosol | 84.78 | 96.89 |
| TraesCS6A01G231200.1 | Wheat | cytosol | 83.7 | 95.65 |
| OQU85305 | Sorghum | cytosol | 78.8 | 90.62 |
| Zm00001d003118_P001 | Maize | cytosol | 77.17 | 90.45 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 77.17 | 88.75 |
| CDX87000 | Canola | cytosol | 24.46 | 88.24 |
| KRH03569 | Soybean | cytosol, nucleus | 72.83 | 84.28 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 72.83 | 83.75 |
| KRH20240 | Soybean | nucleus | 72.28 | 83.65 |
| GSMUA_Achr6P35270_001 | Banana | cytosol | 72.28 | 83.65 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 72.28 | 83.12 |
| AT5G23740.1 | Thale cress | cytosol | 71.74 | 83.02 |
| KRH37857 | Soybean | cytosol | 71.74 | 83.02 |
| AT4G30800.1 | Thale cress | cytosol | 71.2 | 82.39 |
| Solyc12g042080.1.1 | Tomato | nucleus | 71.2 | 82.39 |
| Bra029928.1-P | Field mustard | cytosol | 71.2 | 82.39 |
| CDX83060 | Canola | cytosol | 71.2 | 82.39 |
| PGSC0003DMT400015118 | Potato | cytosol | 69.57 | 82.05 |
| AT3G48930.1 | Thale cress | cytosol | 71.2 | 81.88 |
| CDY05882 | Canola | cytosol | 70.65 | 81.76 |
| Bra009706.1-P | Field mustard | cytosol | 70.65 | 81.76 |
| Bra026484.1-P | Field mustard | cytosol | 70.65 | 81.76 |
| Bra029381.1-P | Field mustard | cytosol | 70.65 | 81.76 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 70.65 | 81.76 |
| Solyc06g073790.2.1 | Tomato | cytosol | 70.65 | 81.76 |
| CDX87158 | Canola | cytosol | 70.65 | 81.76 |
| CDY46968 | Canola | cytosol | 70.65 | 81.76 |
| CDY64707 | Canola | cytosol | 70.65 | 81.76 |
| CDY69343 | Canola | cytosol | 70.65 | 81.76 |
| GSMUA_Achr6P22460_001 | Banana | cytosol | 70.65 | 81.25 |
| KRH75732 | Soybean | cytosol, plastid | 51.63 | 80.51 |
| CDY16867 | Canola | cytosol | 69.57 | 80.5 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 44.02 | 80.2 |
| PGSC0003DMT400013305 | Potato | cytosol | 69.02 | 79.87 |
| GSMUA_Achr7P20890_001 | Banana | cytosol | 53.8 | 79.2 |
| GSMUA_Achr4P20370_001 | Banana | cytosol | 47.83 | 76.52 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 72.28 | 75.14 |
| CDY44261 | Canola | cytosol | 70.65 | 73.45 |
| CDX96205 | Canola | cytosol | 57.61 | 72.6 |
| PGSC0003DMT400015117 | Potato | cytosol | 69.02 | 70.95 |
| GSMUA_Achr9P09150_001 | Banana | cytosol | 50.54 | 66.91 |
| HORVU2Hr1G099230.8 | Barley | cytosol, mitochondrion | 73.37 | 65.53 |
| CDX88047 | Canola | vacuole | 70.65 | 63.11 |
| CDY64632 | Canola | extracellular | 72.28 | 57.83 |
| CDX86999 | Canola | mitochondrion | 21.74 | 44.94 |
| GSMUA_Achr3P13330_001 | Banana | plastid | 51.09 | 44.76 |
| Bra018026.1-P | Field mustard | cytosol | 65.76 | 43.21 |
| CDX91453 | Canola | cytosol | 57.07 | 43.21 |
| CDX80385 | Canola | cytosol | 70.65 | 33.51 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | UniProt:A0A287U966 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU6Hr1G056610 |
| EnsemblPlants:HORVU6Hr1G056610.3 | InterPro:NA-bd_OB-fold | PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 |
| ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF18 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS |
| InterPro:Ribosomal_S17_arc-typ | SUPFAM:SSF50249 | TIGRFAMs:TIGR03630 | UniParc:UPI000B46EBD2 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:365341438..365344456
Molecular Weight (calculated)
20676.4 Da
IEP (calculated)
11.355
GRAVY (calculated)
-0.501
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: PSLASRRLVR AAVGPIAFEH QPWQSRQTEK AFLKQPKVFL CSKKATKGNN KPGKEGNRFW KSVGLGFKTP KEAIEGTYID KKCPFTGTVS IRGRIIAGTC
101: HSAKMNRTII VRRNYLHYVK KYQRYEKRHS NIPAHISPCF RVREGDHVII GQCRPLSKTV RFNVLKVVPA GSKSGAVKKA FTGV
101: HSAKMNRTII VRRNYLHYVK KYQRYEKRHS NIPAHISPCF RVREGDHVII GQCRPLSKTV RFNVLKVVPA GSKSGAVKKA FTGV
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYVDKKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRD YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
Arabidopsis Description
RPS11A40S ribosomal protein S11-1 [Source:UniProtKB/Swiss-Prot;Acc:P16181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.