Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G443000.1 | Wheat | cytosol, golgi, nucleus, unclear | 76.7 | 99.37 |
| TraesCS2D01G421300.1 | Wheat | cytosol | 76.7 | 99.37 |
| Os04t0613600-00 | Rice | cytosol | 70.87 | 90.68 |
| Os07t0565000-01 | Rice | cytosol | 70.87 | 90.68 |
| Os07t0565100-00 | Rice | nucleus | 70.87 | 90.68 |
| Os04t0613500-00 | Rice | cytosol | 34.47 | 88.75 |
| GSMUA_Achr4P20380_001 | Banana | cytosol | 27.18 | 83.58 |
| GSMUA_Achr3P13340_001 | Banana | cytosol | 26.21 | 80.6 |
| HORVU6Hr1G056610.3 | Barley | mitochondrion | 65.53 | 73.37 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | UniProt:A0A287J4N7 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU2Hr1G099230 |
| EnsemblPlants:HORVU2Hr1G099230.8 | InterPro:NA-bd_OB-fold | PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 |
| ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF18 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS |
| InterPro:Ribosomal_S17_arc-typ | SUPFAM:SSF50249 | TIGRFAMs:TIGR03630 | UniParc:UPI000B4838C4 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:-:687150086..687152467
Molecular Weight (calculated)
21188.1 Da
IEP (calculated)
11.501
GRAVY (calculated)
-0.393
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: PTPVSASPPR TRIPALRRRX XXXXXXXXXX XXXXAAASEP LEAHLVAMAE QTEKSFLKQP KVFLSTKKAD KAKRPGKAGN RFWKSVGLGF KTPREAIEGT
101: YIDKKCPFTG TVAIRGRIIA GTCHSAKMNR TIIVRRNYLH FVKKYQRYEK RHSNIPAHIS PCFRVKEGDH VIIGQCRPLS KTVRFNVLKV VPAGTTGGGK
201: KAFIAA
101: YIDKKCPFTG TVAIRGRIIA GTCHSAKMNR TIIVRRNYLH FVKKYQRYEK RHSNIPAHIS PCFRVKEGDH VIIGQCRPLS KTVRFNVLKV VPAGTTGGGK
201: KAFIAA
001: MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYIDSKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
101: YEKRHSNIPA HVSPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
Arabidopsis Description
RPS11CRPS11-BETA [Source:UniProtKB/TrEMBL;Acc:A0A178UPD3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.