Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12457 | Sorghum | cytosol | 97.45 | 95.62 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 95.54 | 93.75 |
| TraesCS6D01G203900.1 | Wheat | cytosol | 92.36 | 90.06 |
| TraesCS6A01G231200.1 | Wheat | cytosol | 91.08 | 88.82 |
| Zm00001d026286_P001 | Maize | cytosol | 87.9 | 86.79 |
| Zm00001d002339_P001 | Maize | plasma membrane | 87.9 | 86.79 |
| CDX87000 | Canola | cytosol | 28.03 | 86.27 |
| AT4G30800.1 | Thale cress | cytosol | 85.99 | 84.91 |
| CDX83060 | Canola | cytosol | 85.35 | 84.28 |
| AT5G23740.1 | Thale cress | cytosol | 85.35 | 84.28 |
| Bra029928.1-P | Field mustard | cytosol | 85.35 | 84.28 |
| KRH03569 | Soybean | cytosol, nucleus | 85.35 | 84.28 |
| CDY64707 | Canola | cytosol | 85.35 | 84.28 |
| CDY05882 | Canola | cytosol | 85.35 | 84.28 |
| AT3G48930.1 | Thale cress | cytosol | 85.35 | 83.75 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 85.35 | 83.75 |
| CDX87158 | Canola | cytosol | 84.71 | 83.65 |
| CDY46968 | Canola | cytosol | 84.71 | 83.65 |
| Bra009706.1-P | Field mustard | cytosol | 84.71 | 83.65 |
| CDY69343 | Canola | cytosol | 84.71 | 83.65 |
| Bra029381.1-P | Field mustard | cytosol | 84.71 | 83.65 |
| Bra026484.1-P | Field mustard | cytosol | 84.71 | 83.65 |
| KRH37857 | Soybean | cytosol | 84.71 | 83.65 |
| KRH20240 | Soybean | nucleus | 84.71 | 83.65 |
| PGSC0003DMT400015118 | Potato | cytosol | 82.8 | 83.33 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 84.71 | 83.12 |
| GSMUA_Achr6P35270_001 | Banana | cytosol | 84.08 | 83.02 |
| CDY16867 | Canola | cytosol | 83.44 | 82.39 |
| Solyc12g042080.1.1 | Tomato | nucleus | 82.8 | 81.76 |
| GSMUA_Achr7P20890_001 | Banana | cytosol | 64.97 | 81.6 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 82.17 | 81.13 |
| Solyc06g073790.2.1 | Tomato | cytosol | 82.17 | 81.13 |
| KRH75732 | Soybean | cytosol, plastid | 60.51 | 80.51 |
| PGSC0003DMT400013305 | Potato | cytosol | 80.89 | 79.87 |
| GSMUA_Achr6P22460_001 | Banana | cytosol | 80.89 | 79.38 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 49.68 | 77.23 |
| HORVU6Hr1G056610.3 | Barley | mitochondrion | 90.45 | 77.17 |
| GSMUA_Achr4P20370_001 | Banana | cytosol | 55.41 | 75.65 |
| CDX96205 | Canola | cytosol | 69.43 | 74.66 |
| CDY44261 | Canola | cytosol | 82.8 | 73.45 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 82.8 | 73.45 |
| PGSC0003DMT400015117 | Potato | cytosol | 79.62 | 69.83 |
| CDX88047 | Canola | vacuole | 84.71 | 64.56 |
| GSMUA_Achr9P09150_001 | Banana | cytosol | 56.05 | 63.31 |
| CDY64632 | Canola | extracellular | 85.35 | 58.26 |
| CDX86999 | Canola | mitochondrion | 28.03 | 49.44 |
| Bra018026.1-P | Field mustard | cytosol | 77.71 | 43.57 |
| CDX91453 | Canola | cytosol | 66.88 | 43.21 |
| GSMUA_Achr3P13330_001 | Banana | plastid | 56.05 | 41.9 |
| CDX80385 | Canola | cytosol | 84.71 | 34.28 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | UniProt:A0A1D6E6T5 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| InterPro:NA-bd_OB-fold | ProteinID:ONM16158.1 | PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 |
| ScanProsite:PS00056 | PANTHER:PTHR10744 | PANTHER:PTHR10744:SF18 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS |
| SUPFAM:SSF50249 | UniParc:UPI0008449CFC | EnsemblPlantsGene:Zm00001d003118 | EnsemblPlants:Zm00001d003118_P001 | EnsemblPlants:Zm00001d003118_T001 | : |
Description
40S ribosomal protein S11-1
Coordinates
chr2:+:32787350..32790222
Molecular Weight (calculated)
17542.7 Da
IEP (calculated)
11.256
GRAVY (calculated)
-0.383
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQTERAFL KQPKVFLCSK KATKVNKPGK GGNRFWKNIG LGFKTPREAI EGTYIDKKCP FTGTVSIRGR IIAGTCHSAK MNRTIIVRRN YLHFVKKYEK
101: RHSNIPAHIS PCFRVKEGDH VIIGQCRPVS KTVRFNVLKV IPAGSKSGAV KKAFTAA
101: RHSNIPAHIS PCFRVKEGDH VIIGQCRPVS KTVRFNVLKV IPAGSKSGAV KKAFTAA
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYVDKKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRD YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
Arabidopsis Description
RPS11A40S ribosomal protein S11-1 [Source:UniProtKB/Swiss-Prot;Acc:P16181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.