Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85305 | Sorghum | cytosol | 98.75 | 98.75 |
| Zm00001d003118_P001 | Maize | cytosol | 95.62 | 97.45 |
| Os04t0502300-01 | Rice | cytosol, plasma membrane, plastid | 95.62 | 95.62 |
| CDX87000 | Canola | cytosol | 29.38 | 92.16 |
| EES11414 | Sorghum | cytosol | 90.0 | 90.57 |
| VIT_11s0118g00680.t01 | Wine grape | cytosol | 88.12 | 88.12 |
| AT4G30800.1 | Thale cress | cytosol | 87.5 | 88.05 |
| Bra029928.1-P | Field mustard | cytosol | 87.5 | 88.05 |
| CDX83060 | Canola | cytosol | 87.5 | 88.05 |
| AT5G23740.1 | Thale cress | cytosol | 87.5 | 88.05 |
| KRH03569 | Soybean | cytosol, nucleus | 87.5 | 88.05 |
| CDY05882 | Canola | cytosol | 87.5 | 88.05 |
| CDY64707 | Canola | cytosol | 87.5 | 88.05 |
| AT3G48930.1 | Thale cress | cytosol | 87.5 | 87.5 |
| Bra029381.1-P | Field mustard | cytosol | 86.88 | 87.42 |
| Bra009706.1-P | Field mustard | cytosol | 86.88 | 87.42 |
| KRH20240 | Soybean | nucleus | 86.88 | 87.42 |
| CDY69343 | Canola | cytosol | 86.88 | 87.42 |
| CDY46968 | Canola | cytosol | 86.88 | 87.42 |
| Bra026484.1-P | Field mustard | cytosol | 86.88 | 87.42 |
| CDX87158 | Canola | cytosol | 86.88 | 87.42 |
| VIT_04s0008g06220.t01 | Wine grape | cytosol | 86.88 | 86.88 |
| KRH37857 | Soybean | cytosol | 86.25 | 86.79 |
| GSMUA_Achr6P35270_001 | Banana | cytosol | 86.25 | 86.79 |
| CDY16867 | Canola | cytosol | 85.62 | 86.16 |
| Solyc12g042080.1.1 | Tomato | nucleus | 85.0 | 85.53 |
| PGSC0003DMT400015118 | Potato | cytosol | 83.12 | 85.26 |
| Solyc06g073790.2.1 | Tomato | cytosol | 84.38 | 84.91 |
| Solyc06g073800.2.1 | Tomato | cytosol, nucleus | 84.38 | 84.91 |
| GSMUA_Achr7P20890_001 | Banana | cytosol | 65.62 | 84.0 |
| GSMUA_Achr6P22460_001 | Banana | cytosol | 83.12 | 83.12 |
| KRH75732 | Soybean | cytosol, plastid | 61.25 | 83.05 |
| PGSC0003DMT400013305 | Potato | cytosol | 82.5 | 83.02 |
| PGSC0003DMT400015122 | Potato | mitochondrion | 51.25 | 81.19 |
| GSMUA_Achr4P20370_001 | Banana | cytosol | 57.5 | 80.0 |
| CDX96205 | Canola | cytosol | 70.62 | 77.4 |
| CDY44261 | Canola | cytosol | 85.0 | 76.84 |
| KRH37858 | Soybean | endoplasmic reticulum, extracellular | 84.38 | 76.27 |
| PGSC0003DMT400015117 | Potato | cytosol | 80.0 | 71.51 |
| CDX88047 | Canola | vacuole | 86.88 | 67.48 |
| GSMUA_Achr9P09150_001 | Banana | cytosol | 58.12 | 66.91 |
| CDY64632 | Canola | extracellular | 87.5 | 60.87 |
| CDX86999 | Canola | mitochondrion | 28.75 | 51.69 |
| CDX91453 | Canola | cytosol | 69.38 | 45.68 |
| Bra018026.1-P | Field mustard | cytosol | 79.38 | 45.36 |
| GSMUA_Achr3P13330_001 | Banana | plastid | 58.12 | 44.29 |
| CDX80385 | Canola | cytosol | 86.88 | 35.82 |
Protein Annotations
| MapMan:17.1.3.1.12 | Gene3D:2.40.50.1000 | EntrezGene:8075895 | UniProt:C5XXL8 | EnsemblPlants:EES12457 | ProteinID:EES12457 |
| ProteinID:EES12457.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022627 | GO:GO:0030529 |
| InterPro:NA-bd_OB-fold | PFAM:PD001295 | PFAM:PF00366 | PFAM:PF16205 | PRINTS:PR00973 | ScanProsite:PS00056 |
| PANTHER:PTHR10744 | PANTHER:PTHR10744:SF17 | PANTHER:PTHR10744:SF18 | InterPro:Ribosomal_S11_N | InterPro:Ribosomal_S17/S11 | InterPro:Ribosomal_S17_CS |
| InterPro:Ribosomal_S17_arc-typ | EnsemblPlantsGene:SORBI_3006G138100 | SUPFAM:SSF50249 | unigene:Sbi.11947 | TIGRFAMs:TIGR03630 | UniParc:UPI0001A85ECE |
| RefSeq:XP_002448129.1 | RefSeq:XP_002454168.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:50028334..50030478
Molecular Weight (calculated)
17904.1 Da
IEP (calculated)
11.200
GRAVY (calculated)
-0.446
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQTEKAFL KQPKVFLCSK KAAKGNKPGK GGNRFWKNIG LGFKTPREAI EGTYIDKKCP FTGTVSIRGR IIAGTCHSAK MNRTIIVRRN YLHFVKKYQR
101: YEKRHSNIPA HISPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGSKS GAVKKAFTAA
101: YEKRHSNIPA HISPCFRVKE GDHVIIGQCR PLSKTVRFNV LKVIPAGSKS GAVKKAFTAA
001: MAEQTEKAFL KQPKVFLSSK KSGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYVDKKCP FTGTVSIRGR ILAGTCHSAK MQRTIIVRRD YLHFVKKYQR
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
101: YEKRHSNIPA HVSPCFRVKE GDHIIIGQCR PLSKTVRFNV LKVIPAGSSS SFGKKAFTGM
Arabidopsis Description
RPS11A40S ribosomal protein S11-1 [Source:UniProtKB/Swiss-Prot;Acc:P16181]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.