Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013323_P001 | Maize | cytosol | 88.42 | 87.58 |
| KXG37622 | Sorghum | cytosol | 87.46 | 87.18 |
| Zm00001d033919_P001 | Maize | plasma membrane | 87.14 | 86.58 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 81.99 | 81.21 |
| TraesCS4A01G247700.1 | Wheat | cytosol | 82.32 | 81.01 |
| TraesCS4D01G066100.1 | Wheat | cytosol | 82.32 | 81.01 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 42.44 | 80.98 |
| HORVU4Hr1G011180.2 | Barley | cytosol | 82.32 | 70.52 |
| GSMUA_Achr1P25170_001 | Banana | cytosol | 53.38 | 67.76 |
| VIT_04s0008g02770.t01 | Wine grape | cytosol | 62.7 | 62.7 |
| KRH08461 | Soybean | cytosol | 64.63 | 62.42 |
| KRH70119 | Soybean | cytosol | 63.67 | 62.26 |
| Solyc06g053760.2.1 | Tomato | cytosol | 61.74 | 61.74 |
| PGSC0003DMT400041982 | Potato | cytosol | 61.09 | 61.09 |
| CDX97497 | Canola | cytosol | 57.56 | 59.08 |
| CDX95050 | Canola | cytosol | 58.2 | 58.96 |
| CDY31137 | Canola | cytosol | 57.56 | 58.88 |
| CDX93553 | Canola | cytosol | 57.88 | 58.63 |
| Bra030733.1-P | Field mustard | cytosol | 57.23 | 58.55 |
| Bra018615.1-P | Field mustard | cytosol | 57.56 | 58.31 |
| AT1G08560.1 | Thale cress | cytosol | 56.91 | 57.1 |
| Os02t0209900-01 | Rice | cytosol | 49.52 | 49.52 |
| Os03t0787000-01 | Rice | plasma membrane | 46.62 | 43.94 |
| Os07t0528900-00 | Rice | cytosol, extracellular, plasma membrane | 15.11 | 42.34 |
| Os06t0168500-01 | Rice | plasma membrane | 37.62 | 38.36 |
| Os12t0192300-00 | Rice | plasma membrane | 32.8 | 29.31 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:107276918 | MapMan:13.4.2.3.1 | MapMan:22.7.1.1 | ProteinID:AAP03411.1 |
| ProteinID:AAR07084.1 | ProteinID:ABF98751.1 | ProteinID:BAS86268.1 | ncoils:Coil | EMBL:DQ231253 | GO:GO:0000149 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006139 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009504 | GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009987 | GO:GO:0012505 |
| GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0016787 |
| GO:GO:0031201 | GO:GO:0046933 | GO:GO:0048278 | GO:GO:0061025 | GO:GO:0099132 | InterPro:IPR000727 |
| EnsemblPlantsGene:Os03g0736500 | EnsemblPlants:Os03t0736500-01 | PFAM:PF00804 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF91 | UniProt:Q84R43 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE |
| SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000018CD6C |
| RefSeq:XP_015631526.1 | SEG:seg | : | : | : | : |
Description
Syntaxin-related protein KNOLLE, OsKNOLLESyntaxin-related protein KNOLLE (Syntaxin 111) (AtSYP111). (Os03t0736500-01)
Coordinates
chr3:+:30192888..30194132
Molecular Weight (calculated)
35014.2 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.329
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFM SYVDLKKAAM KDLEAGGDGV ELPEVGVTDE RLKGFFQETE AVEEEMAAIR DALARLNAAN EEGKSLHQPD ALRALRGRVN ADIIAVLRRA
101: RDIRARLEAM DRANAAQRRL SAGCREGTPL DRTRTALTAA LRKKLKDLML DFQALRQRIM SEYKDTVERR YYTLTGEVPE EEVIERIISE GRSEELLCAA
201: VAEHGKGAVL ATVHEIQDRH DAAREVERSL LELHQVFLDM AVVVESQGEQ LDDIERHVNS ATTYVQGGNK ELRKAREHQR SSRKWLCIGI IILLLLVLLV
301: IVPIATSFKR S
101: RDIRARLEAM DRANAAQRRL SAGCREGTPL DRTRTALTAA LRKKLKDLML DFQALRQRIM SEYKDTVERR YYTLTGEVPE EEVIERIISE GRSEELLCAA
201: VAEHGKGAVL ATVHEIQDRH DAAREVERSL LELHQVFLDM AVVVESQGEQ LDDIERHVNS ATTYVQGGNK ELRKAREHQR SSRKWLCIGI IILLLLVLLV
301: IVPIATSFKR S
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Arabidopsis Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.