Factsheet for Os07t0628400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022223_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	73.12	64.15
Zm00001d022218_P001	Maize	plastid	73.12	38.64
OQU90309	Sorghum	cytosol	75.27	36.08
Zm00001d006924_P001	Maize	plastid	72.04	34.72
EER99750	Sorghum	cytosol	72.04	34.54
Os11t0602600-01	Rice	nucleus	70.97	33.85
Os03t0154700-01	Rice	mitochondrion	70.97	33.85
TraesCS2D01G164100.1	Wheat	golgi, unclear	69.89	33.33
TraesCS2B01G183500.1	Wheat	cytosol, mitochondrion	69.89	33.33
Os03t0379500-01	Rice	cytosol	36.56	32.69
VIT_17s0000g05970.t01	Wine grape	cytosol	67.74	31.98
VIT_14s0108g00460.t01	Wine grape	cytosol	67.74	31.98
Os11t0602500-00	Rice	cytosol	70.97	31.58
KRH56926	Soybean	mitochondrion	66.67	31.47
KRH03454	Soybean	mitochondrion	66.67	31.47
GSMUA_Achr8P10060_001	Banana	cytosol	65.59	30.96
GSMUA_Achr2P06950_001	Banana	cytosol	65.59	30.96
VIT_01s0026g02110.t01	Wine grape	cytosol	65.59	30.96
GSMUA_Achr1P13080_001	Banana	plasma membrane	65.59	30.96
GSMUA_Achr8P30200_001	Banana	cytosol	64.52	30.46
AT5G39850.1	Thale cress	cytosol, mitochondrion	64.52	30.46
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	64.52	30.46
KRH63367	Soybean	nucleus	64.52	30.46
KRH54535	Soybean	cytosol	64.52	30.46
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	63.44	29.95
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	63.44	29.95
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	63.44	29.95
PGSC0003DMT400059349	Potato	cytosol	63.44	29.95
PGSC0003DMT400007431	Potato	cytosol	63.44	29.95
Solyc05g007250.2.1	Tomato	nucleus	62.37	29.44
CDX85058	Canola	cytosol	60.22	28.43
CDX85559	Canola	extracellular	60.22	28.43
CDX78618	Canola	cytosol	60.22	28.43
CDX70599	Canola	cytosol	60.22	28.43
CDX91003	Canola	cytosol	60.22	28.43
CDX69542	Canola	cytosol	60.22	28.43
Bra006289.1-P	Field mustard	cytosol	60.22	28.43
Bra008713.1-P	Field mustard	cytosol	60.22	28.43
HORVU2Hr1G028510.1	Barley	cytosol	72.04	28.39
AT5G15200.1	Thale cress	cytosol	60.22	28.28
Bra023511.1-P	Field mustard	cytosol	56.99	26.9

Protein Annotations

EnsemblPlants:Os07t0628400-00	EnsemblPlantsGene:Os07g0628400	Gene3D:3.10.290.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR002942	InterPro:IPR036986	InterPro:Ribosomal_S4/S9	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf
PANTHER:PTHR11831	PANTHER:PTHR11831:SF21	PFAM:PF01479	ProteinID:BAT02755.1	SEG:seg	SUPFAM:SSF55174
UniParc:UPI0003938E0C	UniProt:A0A0P0X948	MapMan:35.1	:	:	:

Description

Similar to 40S ribosomal protein S9. (Os07t0628400-00)

Coordinates

chr7:-:26036275..26039311

Molecular Weight (calculated)

10302.5 Da

IEP (calculated)

11.108

GRAVY (calculated)

-0.488

Length

93 amino acids

Sequence
(BLAST)

1: TIVFKNGMAK SIHHARVLIR QHHIRVGRQL VNIPSFIVRL ESEKHIAFSL TSPLGGSPAV RVKRKNQKAS GGGGDGEEEE EKELGHRNLS NMI

Best Arabidopsis Sequence Match ( AT5G39850.1 )
(BLAST)

001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE

Arabidopsis Description

RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.