Factsheet for HORVU2Hr1G028510.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G183500.1	Wheat	cytosol, mitochondrion	79.24	95.9
TraesCS2D01G164100.1	Wheat	golgi, unclear	79.24	95.9
Zm00001d006924_P001	Maize	plastid	75.85	92.75
EER99750	Sorghum	cytosol	75.85	92.27
OQU90309	Sorghum	cytosol	75.85	92.27
HORVU5Hr1G038920.1	Barley	plasma membrane	72.03	87.18
Zm00001d022218_P001	Maize	plastid	63.14	84.66
GSMUA_Achr2P06950_001	Banana	cytosol	68.22	81.73
KRH56926	Soybean	mitochondrion	68.22	81.73
KRH03454	Soybean	mitochondrion	68.22	81.73
GSMUA_Achr8P10060_001	Banana	cytosol	68.22	81.73
GSMUA_Achr1P13080_001	Banana	plasma membrane	68.22	81.73
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	67.8	81.22
VIT_14s0108g00460.t01	Wine grape	cytosol	67.8	81.22
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	67.8	81.22
GSMUA_Achr8P30200_001	Banana	cytosol	67.8	81.22
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	67.8	81.22
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	67.8	81.22
PGSC0003DMT400059349	Potato	cytosol	67.8	81.22
VIT_17s0000g05970.t01	Wine grape	cytosol	67.8	81.22
Solyc05g007250.2.1	Tomato	nucleus	67.37	80.71
PGSC0003DMT400007431	Potato	cytosol	67.37	80.71
AT5G39850.1	Thale cress	cytosol, mitochondrion	66.95	80.2
KRH63367	Soybean	nucleus	66.95	80.2
KRH54535	Soybean	cytosol	66.95	80.2
VIT_01s0026g02110.t01	Wine grape	cytosol	66.53	79.7
AT5G15200.1	Thale cress	cytosol	66.53	79.29
CDX91003	Canola	cytosol	64.83	77.67
CDX85559	Canola	extracellular	64.83	77.67
CDX85058	Canola	cytosol	64.83	77.67
CDX78618	Canola	cytosol	64.83	77.67
CDX70599	Canola	cytosol	64.83	77.67
CDX69542	Canola	cytosol	64.83	77.67
Bra008713.1-P	Field mustard	cytosol	64.83	77.67
Bra006289.1-P	Field mustard	cytosol	64.83	77.67
Zm00001d022223_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	34.32	76.42
Bra023511.1-P	Field mustard	cytosol	63.14	75.63
Os07t0628400-00	Rice	cytosol	28.39	72.04

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	UniProt:A0A287HID1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	EnsemblPlantsGene:HORVU2Hr1G028510	EnsemblPlants:HORVU2Hr1G028510.1
InterPro:IPR002942	InterPro:IPR036986	PFAM:PF00163	PFAM:PF01479	PFscan:PS50889	PANTHER:PTHR11831
PANTHER:PTHR11831:SF21	InterPro:Ribosomal_S4/S9	InterPro:Ribosomal_S4/S9_N	InterPro:Ribosomal_S4/S9_euk/arc	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf
SMART:SM00363	SMART:SM01390	SUPFAM:SSF55174	TIGRFAMs:TIGR01018	UniParc:UPI000B471D39	SEG:seg

Description

No Description!

Coordinates

chrchr2H:-:97111015..97114741

Molecular Weight (calculated)

26766.1 Da

IEP (calculated)

10.395

GRAVY (calculated)

-0.646

Length

236 amino acids

Sequence
(BLAST)

001: FSPTLYNIAS SSWPPLSTDP FTPTGGAQLD DPSDPAAEAA AMVHVNFYRN YGKTFKKPRR PYEKERLDAE LKLVGEYGLR AKRELWRVQY ALSRIRNAAR
101: ELLTLDEKSP RRIFEGAALL RRMNRYGLLS EDQNKLDYVL ALTVENFLQR RLQTIVFKNG MAKSIHHARV LIRQRHIRVG KQLVNIPSFM VRVDTEKHVD
201: FSLTSPLGGG PAGRVKRKNQ KKASGGGGDE GEEEED

Best Arabidopsis Sequence Match ( AT5G15200.1 )
(BLAST)

001: MVHVCYYRNY GKTFKGPRRP YEKERLDSEL KLVGEYGLRN KRELWRVQYS LSRIRNAARD LLTLDEKSPR RIFEGEALLR RMNRYGLLDE SQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHSRVL IRQRHIRVGK QLVNIPSFMV RLDSQKHIDF ALTSPFGGGR PGRVKRRNEK SASKKASGGG DADGDDEE

Arabidopsis Description

RPS9B40S ribosomal protein S9-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.