Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006289.1-P | Field mustard | cytosol | 97.47 | 97.97 |
| Bra008713.1-P | Field mustard | cytosol | 97.47 | 97.97 |
| CDX69542 | Canola | cytosol | 97.47 | 97.97 |
| CDX70599 | Canola | cytosol | 97.47 | 97.97 |
| CDX78618 | Canola | cytosol | 97.47 | 97.97 |
| CDX85058 | Canola | cytosol | 97.47 | 97.97 |
| CDX85559 | Canola | extracellular | 97.47 | 97.97 |
| CDX91003 | Canola | cytosol | 97.47 | 97.97 |
| Bra023511.1-P | Field mustard | cytosol | 95.45 | 95.94 |
| AT5G39850.1 | Thale cress | cytosol, mitochondrion | 88.38 | 88.83 |
| GSMUA_Achr8P30200_001 | Banana | cytosol | 87.88 | 88.32 |
| GSMUA_Achr2P06950_001 | Banana | cytosol | 87.37 | 87.82 |
| Solyc05g007250.2.1 | Tomato | nucleus | 87.37 | 87.82 |
| GSMUA_Achr8P10060_001 | Banana | cytosol | 87.37 | 87.82 |
| GSMUA_Achr1P13080_001 | Banana | plasma membrane | 87.37 | 87.82 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 86.87 | 87.31 |
| Solyc04g005680.2.1 | Tomato | nucleus, plastid, unclear | 86.87 | 87.31 |
| Solyc01g010580.2.1 | Tomato | cytosol, mitochondrion | 86.87 | 87.31 |
| Solyc01g010540.2.1 | Tomato | cytosol, mitochondrion | 86.87 | 87.31 |
| VIT_14s0108g00460.t01 | Wine grape | cytosol | 86.36 | 86.8 |
| VIT_17s0000g05970.t01 | Wine grape | cytosol | 86.36 | 86.8 |
| PGSC0003DMT400059349 | Potato | cytosol | 86.36 | 86.8 |
| PGSC0003DMT400007431 | Potato | cytosol | 86.36 | 86.8 |
| VIT_01s0026g02110.t01 | Wine grape | cytosol | 85.86 | 86.29 |
| KRH03454 | Soybean | mitochondrion | 84.85 | 85.28 |
| KRH56926 | Soybean | mitochondrion | 84.85 | 85.28 |
| KRH54535 | Soybean | cytosol | 84.34 | 84.77 |
| KRH63367 | Soybean | nucleus | 84.34 | 84.77 |
| Zm00001d047186_P001 | Maize | extracellular, plasma membrane | 80.81 | 82.9 |
| EER99750 | Sorghum | cytosol | 80.3 | 81.96 |
| Zm00001d006924_P001 | Maize | plastid | 79.8 | 81.87 |
| Os03t0379500-01 | Rice | cytosol | 42.93 | 81.73 |
| OQU90309 | Sorghum | cytosol | 79.8 | 81.44 |
| Os03t0154700-01 | Rice | mitochondrion | 79.29 | 80.51 |
| Os11t0602600-01 | Rice | nucleus | 79.29 | 80.51 |
| TraesCS2B01G183500.1 | Wheat | cytosol, mitochondrion | 78.28 | 79.49 |
| TraesCS2D01G164100.1 | Wheat | golgi, unclear | 78.28 | 79.49 |
| Zm00001d041760_P001 | Maize | plasma membrane, plastid | 77.78 | 79.38 |
| EES15996 | Sorghum | cytosol | 77.78 | 78.97 |
| Zm00001d022218_P001 | Maize | plastid | 69.7 | 78.41 |
| TraesCS5D01G121600.1 | Wheat | cytosol, mitochondrion | 75.76 | 76.92 |
| HORVU5Hr1G038920.1 | Barley | plasma membrane | 75.76 | 76.92 |
| TraesCS5B01G112200.1 | Wheat | golgi, nucleus, unclear | 75.76 | 76.92 |
| TraesCS5A01G104000.1 | Wheat | cytosol, mitochondrion | 75.76 | 76.92 |
| Os11t0602500-00 | Rice | cytosol | 76.77 | 72.73 |
| OQU92521 | Sorghum | mitochondrion | 72.73 | 72.36 |
| Zm00001d029340_P003 | Maize | cytosol | 50.51 | 71.94 |
| Zm00001d022223_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 36.36 | 67.92 |
| HORVU2Hr1G028510.1 | Barley | cytosol | 79.29 | 66.53 |
| Os07t0628400-00 | Rice | cytosol | 28.28 | 60.22 |
| Zm00001d006923_P003 | Maize | cytosol | 65.66 | 53.5 |
Protein Annotations
| MapMan:17.1.3.1.10 | Gene3D:3.10.290.10 | EntrezGene:831372 | UniProt:A0A178UUQ0 | ProteinID:AED92128.1 | EMBL:AK228437 |
| ArrayExpress:AT5G15200 | EnsemblPlantsGene:AT5G15200 | RefSeq:AT5G15200 | TAIR:AT5G15200 | RefSeq:AT5G15200-TAIR-G | EnsemblPlants:AT5G15200.1 |
| TAIR:AT5G15200.1 | Unigene:At.1767 | EMBL:BT010847 | EMBL:BT011315 | ProteinID:CAB89330.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0019843 |
| GO:GO:0022626 | GO:GO:0022627 | GO:GO:0030312 | GO:GO:0030529 | GO:GO:0042788 | GO:GO:0045903 |
| InterPro:IPR002942 | InterPro:IPR036986 | RefSeq:NP_197024.1 | ProteinID:OAO96491.1 | PFAM:PF00163 | PFAM:PF01479 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00632 | PFscan:PS50889 |
| PANTHER:PTHR11831 | PANTHER:PTHR11831:SF21 | UniProt:Q9LXG1 | InterPro:Ribosomal_S4/S9 | InterPro:Ribosomal_S4/S9_N | InterPro:Ribosomal_S4/S9_euk/arc |
| InterPro:Ribosomal_S4_CS | InterPro:S4_RNA-bd | InterPro:S4_RNA-bd_sf | SMART:SM00363 | SMART:SM01390 | SUPFAM:SSF55174 |
| TIGRFAMs:TIGR01018 | UniParc:UPI00000A200E | SEG:seg | : | : | : |
Description
RPS9B40S ribosomal protein S9-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG1]
Coordinates
chr5:-:4934810..4936429
Molecular Weight (calculated)
23037.8 Da
IEP (calculated)
10.746
GRAVY (calculated)
-0.778
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHVCYYRNY GKTFKGPRRP YEKERLDSEL KLVGEYGLRN KRELWRVQYS LSRIRNAARD LLTLDEKSPR RIFEGEALLR RMNRYGLLDE SQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHSRVL IRQRHIRVGK QLVNIPSFMV RLDSQKHIDF ALTSPFGGGR PGRVKRRNEK SASKKASGGG DADGDDEE
101: LTVENFLERR LQTIVFKSGM AKSIHHSRVL IRQRHIRVGK QLVNIPSFMV RLDSQKHIDF ALTSPFGGGR PGRVKRRNEK SASKKASGGG DADGDDEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.