Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G112200.1 | Wheat | golgi, nucleus, unclear | 100.0 | 100.0 |
| TraesCS5A01G104000.1 | Wheat | cytosol, mitochondrion | 100.0 | 100.0 |
| HORVU5Hr1G038920.1 | Barley | plasma membrane | 100.0 | 100.0 |
| Zm00001d041760_P001 | Maize | plasma membrane, plastid | 95.38 | 95.88 |
| EES15996 | Sorghum | cytosol | 94.87 | 94.87 |
| TraesCS2D01G164100.1 | Wheat | golgi, unclear | 85.64 | 85.64 |
| GSMUA_Achr8P10060_001 | Banana | cytosol | 83.59 | 82.74 |
| GSMUA_Achr2P06950_001 | Banana | cytosol | 83.59 | 82.74 |
| GSMUA_Achr1P13080_001 | Banana | plasma membrane | 83.59 | 82.74 |
| Solyc01g010580.2.1 | Tomato | cytosol, mitochondrion | 83.08 | 82.23 |
| Solyc01g010540.2.1 | Tomato | cytosol, mitochondrion | 83.08 | 82.23 |
| PGSC0003DMT400059349 | Potato | cytosol | 83.08 | 82.23 |
| Solyc04g005680.2.1 | Tomato | nucleus, plastid, unclear | 83.08 | 82.23 |
| GSMUA_Achr8P30200_001 | Banana | cytosol | 83.08 | 82.23 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 83.08 | 82.23 |
| Solyc05g007250.2.1 | Tomato | nucleus | 82.56 | 81.73 |
| PGSC0003DMT400007431 | Potato | cytosol | 82.56 | 81.73 |
| KRH03454 | Soybean | mitochondrion | 81.03 | 80.2 |
| KRH56926 | Soybean | mitochondrion | 81.03 | 80.2 |
| VIT_14s0108g00460.t01 | Wine grape | cytosol | 80.51 | 79.7 |
| VIT_17s0000g05970.t01 | Wine grape | cytosol | 80.51 | 79.7 |
| VIT_01s0026g02110.t01 | Wine grape | cytosol | 80.0 | 79.19 |
| AT5G39850.1 | Thale cress | cytosol, mitochondrion | 79.49 | 78.68 |
| KRH54535 | Soybean | cytosol | 79.49 | 78.68 |
| KRH63367 | Soybean | nucleus | 79.49 | 78.68 |
| AT5G15200.1 | Thale cress | cytosol | 76.92 | 75.76 |
| Bra008713.1-P | Field mustard | cytosol | 75.9 | 75.13 |
| CDX91003 | Canola | cytosol | 75.9 | 75.13 |
| CDX85559 | Canola | extracellular | 75.9 | 75.13 |
| Bra006289.1-P | Field mustard | cytosol | 75.9 | 75.13 |
| CDX85058 | Canola | cytosol | 75.9 | 75.13 |
| CDX78618 | Canola | cytosol | 75.9 | 75.13 |
| CDX70599 | Canola | cytosol | 75.9 | 75.13 |
| CDX69542 | Canola | cytosol | 75.9 | 75.13 |
| Bra023511.1-P | Field mustard | cytosol | 73.85 | 73.1 |
Protein Annotations
| MapMan:17.1.3.1.10 | Gene3D:3.10.290.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0015935 | GO:GO:0019538 | GO:GO:0019843 | InterPro:IPR002942 | InterPro:IPR036986 | PFAM:PF00163 |
| PFAM:PF01479 | ScanProsite:PS00632 | PFscan:PS50889 | PANTHER:PTHR11831 | PANTHER:PTHR11831:SF15 | InterPro:Ribosomal_S4/S9 |
| InterPro:Ribosomal_S4/S9_N | InterPro:Ribosomal_S4/S9_euk/arc | InterPro:Ribosomal_S4_CS | InterPro:S4_RNA-bd | InterPro:S4_RNA-bd_sf | SMART:SM00363 |
| SMART:SM01390 | SUPFAM:SSF55174 | TIGRFAMs:TIGR01018 | EnsemblPlantsGene:TraesCS5D01G121600 | EnsemblPlants:TraesCS5D01G121600.1 | TIGR:cd00165 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:174827257..174829515
Molecular Weight (calculated)
22489.4 Da
IEP (calculated)
10.985
GRAVY (calculated)
-0.638
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHVNFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARH LLTLDEKNPR RIFEGAALLR RMNRYGLLAE GQDKLDYVLA
101: LTAENFLARR LQTLVFKAGM AKSIHHARVL IRQRHIRVGR QIVNVPSFMV RVESEKHIDF SLTSPFGGGP AGRVKRKNQK KASGGGDAGG DEEEE
101: LTAENFLARR LQTLVFKAGM AKSIHHARVL IRQRHIRVGR QIVNVPSFMV RVESEKHIDF SLTSPFGGGP AGRVKRKNQK KASGGGDAGG DEEEE
001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE
Arabidopsis Description
RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.