CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047186_P001	Maize	extracellular, plasma membrane	86.43	89.12
Zm00001d029340_P003	Maize	cytosol	61.31	87.77
OQU90309	Sorghum	cytosol	81.91	84.02
EER99750	Sorghum	cytosol	81.91	84.02
EES15996	Sorghum	cytosol	78.39	80.0
GSMUA_Achr1P13080_001	Banana	plasma membrane	76.88	77.67
GSMUA_Achr8P30200_001	Banana	cytosol	76.38	77.16
GSMUA_Achr8P10060_001	Banana	cytosol	76.38	77.16
GSMUA_Achr2P06950_001	Banana	cytosol	76.38	77.16
KRH56926	Soybean	mitochondrion	75.88	76.65
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	75.88	76.65
KRH03454	Soybean	mitochondrion	75.88	76.65
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	75.38	76.14
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	75.38	76.14
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	75.38	76.14
Solyc05g007250.2.1	Tomato	nucleus	74.87	75.63
VIT_14s0108g00460.t01	Wine grape	cytosol	74.87	75.63
KRH54535	Soybean	cytosol	74.87	75.63
VIT_17s0000g05970.t01	Wine grape	cytosol	74.87	75.63
KRH63367	Soybean	nucleus	74.87	75.63
PGSC0003DMT400007431	Potato	cytosol	74.87	75.63
VIT_01s0026g02110.t01	Wine grape	cytosol	74.37	75.13
PGSC0003DMT400059349	Potato	cytosol	74.37	75.13
AT5G39850.1	Thale cress	cytosol, mitochondrion	74.37	75.13
Os03t0379500-01	Rice	cytosol	38.19	73.08
AT5G15200.1	Thale cress	cytosol	72.36	72.73
Bra006289.1-P	Field mustard	cytosol	71.86	72.59
Bra008713.1-P	Field mustard	cytosol	71.86	72.59
CDX85559	Canola	extracellular	71.86	72.59
CDX69542	Canola	cytosol	71.86	72.59
CDX70599	Canola	cytosol	71.86	72.59
CDX78618	Canola	cytosol	71.86	72.59
CDX85058	Canola	cytosol	71.86	72.59
CDX91003	Canola	cytosol	71.86	72.59
Bra023511.1-P	Field mustard	cytosol	70.35	71.07

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	UniProt:A0A1Z5S9D2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	InterPro:IPR002942	InterPro:IPR036986
EnsemblPlants:OQU92521	ProteinID:OQU92521	ProteinID:OQU92521.1	PFAM:PF00163	PFAM:PF01479	PFscan:PS50889
PANTHER:PTHR11831	PANTHER:PTHR11831:SF21	InterPro:Ribosomal_S4/S9	InterPro:Ribosomal_S4/S9_N	InterPro:Ribosomal_S4/S9_euk/arc	InterPro:S4_RNA-bd
InterPro:S4_RNA-bd_sf	SMART:SM00363	SMART:SM01390	EnsemblPlantsGene:SORBI_3001G355400	SUPFAM:SSF55174	TIGRFAMs:TIGR01018
UniParc:UPI000B8BAEA6	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:64519886..64522183

Molecular Weight (calculated)

22976.6 Da

IEP (calculated)

10.814

GRAVY (calculated)

-0.795

Length

199 amino acids

Sequence
(BLAST)

001: SHSTPRGGGD QYRRRAAEAA SAMVHVSFYR NYGKTFKKPR RPYEKERLDA ELKLVGEYGL RCKRELWRVQ YALSRIRNAA RELLTLDEKN PRRIFEGENK
101: LDYVLALTVE NFLQRRLQTI VFKNGMAKSI HHARVLIRQR HIRVGRQLVN IPSFMVRVDS EKHIDFSLTS PLVGGEPGRV KRKNSKKASG GGGDDEEEE

Best Arabidopsis Sequence Match ( AT5G39850.1 )
(BLAST)

001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE

Arabidopsis Description

RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.