CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU90309	Sorghum	cytosol	97.42	97.42
Zm00001d006924_P001	Maize	plastid	96.91	97.41
TraesCS2B01G183500.1	Wheat	cytosol, mitochondrion	91.24	90.77
TraesCS2D01G164100.1	Wheat	golgi, unclear	91.24	90.77
Zm00001d022218_P001	Maize	plastid	81.44	89.77
EES15996	Sorghum	cytosol	90.21	89.74
GSMUA_Achr2P06950_001	Banana	cytosol	87.63	86.29
GSMUA_Achr8P10060_001	Banana	cytosol	87.63	86.29
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	87.11	85.79
GSMUA_Achr8P30200_001	Banana	cytosol	87.11	85.79
GSMUA_Achr1P13080_001	Banana	plasma membrane	86.6	85.28
Solyc05g007250.2.1	Tomato	nucleus	85.57	84.26
KRH56926	Soybean	mitochondrion	85.05	83.76
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	85.05	83.76
KRH03454	Soybean	mitochondrion	85.05	83.76
AT5G39850.1	Thale cress	cytosol, mitochondrion	85.05	83.76
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	85.05	83.76
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	85.05	83.76
VIT_14s0108g00460.t01	Wine grape	cytosol	84.54	83.25
VIT_17s0000g05970.t01	Wine grape	cytosol	84.54	83.25
PGSC0003DMT400007431	Potato	cytosol	84.54	83.25
VIT_01s0026g02110.t01	Wine grape	cytosol	84.02	82.74
PGSC0003DMT400059349	Potato	cytosol	84.02	82.74
KRH54535	Soybean	cytosol	83.51	82.23
KRH63367	Soybean	nucleus	83.51	82.23
OQU92521	Sorghum	mitochondrion	84.02	81.91
AT5G15200.1	Thale cress	cytosol	81.96	80.3
Zm00001d022223_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	43.81	80.19
CDX91003	Canola	cytosol	80.93	79.7
CDX85559	Canola	extracellular	80.93	79.7
CDX85058	Canola	cytosol	80.93	79.7
CDX78618	Canola	cytosol	80.93	79.7
CDX70599	Canola	cytosol	80.93	79.7
CDX69542	Canola	cytosol	80.93	79.7
Bra008713.1-P	Field mustard	cytosol	80.93	79.7
Bra006289.1-P	Field mustard	cytosol	80.93	79.7
Bra023511.1-P	Field mustard	cytosol	78.87	77.67
HORVU2Hr1G028510.1	Barley	cytosol	92.27	75.85
Os07t0628400-00	Rice	cytosol	34.54	72.04

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	EntrezGene:8063511	UniProt:C5X364	EnsemblPlants:EER99750	ProteinID:EER99750
ProteinID:EER99750.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015935	GO:GO:0019538	GO:GO:0019843	GO:GO:0022627	GO:GO:0030529	GO:GO:0045903
InterPro:IPR002942	InterPro:IPR036986	PFAM:PF00163	PFAM:PF01479	PFscan:PS50889	PANTHER:PTHR11831
PANTHER:PTHR11831:SF21	InterPro:Ribosomal_S4/S9	InterPro:Ribosomal_S4/S9_N	InterPro:Ribosomal_S4/S9_euk/arc	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf
SMART:SM00363	SMART:SM01390	EnsemblPlantsGene:SORBI_3002G385100	SUPFAM:SSF55174	unigene:Sbi.21531	TIGRFAMs:TIGR01018
UniParc:UPI0001A83F97	RefSeq:XP_002463229.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73993014..73996069

Molecular Weight (calculated)

22564.4 Da

IEP (calculated)

10.816

GRAVY (calculated)

-0.729

Length

194 amino acids

Sequence
(BLAST)

001: MVHVSFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYA LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLGE GQNKLDYVLA
101: LTVENFLQRR LQTIVFKNGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESEKHIDF SLTSPLGGGP AGRVKRKNQK KASGGGDDGE DDDE

Best Arabidopsis Sequence Match ( AT5G39850.1 )
(BLAST)

001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE

Arabidopsis Description

RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.