Factsheet for Zm00001d022223_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid, secretory
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0628400-00	Rice	cytosol	64.15	73.12
Zm00001d022218_P001	Maize	plastid	86.79	52.27
OQU90309	Sorghum	cytosol	83.02	45.36
EER99750	Sorghum	cytosol	80.19	43.81
Zm00001d006924_P001	Maize	plastid	78.3	43.01
Zm00001d047186_P001	Maize	extracellular, plasma membrane	74.53	40.93
GSMUA_Achr8P10060_001	Banana	cytosol	74.53	40.1
GSMUA_Achr2P06950_001	Banana	cytosol	74.53	40.1
TraesCS2D01G164100.1	Wheat	golgi, unclear	73.58	40.0
TraesCS2B01G183500.1	Wheat	cytosol, mitochondrion	73.58	40.0
KRH56926	Soybean	mitochondrion	73.58	39.59
KRH03454	Soybean	mitochondrion	73.58	39.59
GSMUA_Achr8P30200_001	Banana	cytosol	73.58	39.59
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	73.58	39.59
AT5G39850.1	Thale cress	cytosol, mitochondrion	72.64	39.09
GSMUA_Achr1P13080_001	Banana	plasma membrane	72.64	39.09
VIT_17s0000g05970.t01	Wine grape	cytosol	72.64	39.09
VIT_14s0108g00460.t01	Wine grape	cytosol	72.64	39.09
VIT_01s0026g02110.t01	Wine grape	cytosol	72.64	39.09
Zm00001d041760_P001	Maize	plasma membrane, plastid	70.75	38.66
Solyc05g007250.2.1	Tomato	nucleus	71.7	38.58
KRH63367	Soybean	nucleus	70.75	38.07
KRH54535	Soybean	cytosol	70.75	38.07
PGSC0003DMT400007431	Potato	cytosol	70.75	38.07
PGSC0003DMT400059349	Potato	cytosol	70.75	38.07
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	70.75	38.07
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	70.75	38.07
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	70.75	38.07
AT5G15200.1	Thale cress	cytosol	67.92	36.36
CDX91003	Canola	cytosol	66.98	36.04
Bra006289.1-P	Field mustard	cytosol	66.98	36.04
Bra008713.1-P	Field mustard	cytosol	66.98	36.04
CDX85559	Canola	extracellular	66.98	36.04
CDX85058	Canola	cytosol	66.98	36.04
CDX69542	Canola	cytosol	66.98	36.04
CDX70599	Canola	cytosol	66.98	36.04
CDX78618	Canola	cytosol	66.98	36.04
HORVU2Hr1G028510.1	Barley	cytosol	76.42	34.32
Bra023511.1-P	Field mustard	cytosol	63.21	34.01
Zm00001d029340_P003	Maize	cytosol	40.57	30.94
Zm00001d006923_P003	Maize	cytosol	43.4	18.93

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	UniProt:A0A1D6IKG5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
InterPro:IPR002942	InterPro:IPR036986	ProteinID:ONM59894.1	PFAM:PF01479	PANTHER:PTHR11831	PANTHER:PTHR11831:SF21
InterPro:Ribosomal_S4/S9	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf	SUPFAM:SSF55174	UniParc:UPI0008437C3B	EnsemblPlantsGene:Zm00001d022223
EnsemblPlants:Zm00001d022223_P001	EnsemblPlants:Zm00001d022223_T001	SEG:seg	:	:	:

Description

40S ribosomal protein S9-2

Coordinates

chr7:-:173080093..173081794

Molecular Weight (calculated)

11606.1 Da

IEP (calculated)

10.753

GRAVY (calculated)

-0.309

Length

106 amino acids

Sequence
(BLAST)

001: MVSLVRDRTS LIMCFALTVE NFLQRRLQTI VFKNGMAKSI HHARVLIRVG RQPVNIPSFM VRVESEKHID FSLTSPLGGG PAGRVKRKNQ KASGGGGGGD
101: GEEDDE

Best Arabidopsis Sequence Match ( AT5G39850.1 )
(BLAST)

001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE

Arabidopsis Description

RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.