Factsheet for Os03t0379500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047186_P001	Maize	extracellular, plasma membrane	87.5	47.15
AT5G39850.1	Thale cress	cytosol, mitochondrion	82.69	43.65
Bra008713.1-P	Field mustard	cytosol	81.73	43.15
Bra006289.1-P	Field mustard	cytosol	81.73	43.15
CDX69542	Canola	cytosol	81.73	43.15
CDX70599	Canola	cytosol	81.73	43.15
CDX78618	Canola	cytosol	81.73	43.15
CDX85058	Canola	cytosol	81.73	43.15
CDX85559	Canola	extracellular	81.73	43.15
CDX91003	Canola	cytosol	81.73	43.15
GSMUA_Achr8P30200_001	Banana	cytosol	81.73	43.15
GSMUA_Achr1P13080_001	Banana	plasma membrane	81.73	43.15
GSMUA_Achr2P06950_001	Banana	cytosol	81.73	43.15
GSMUA_Achr8P10060_001	Banana	cytosol	81.73	43.15
AT5G15200.1	Thale cress	cytosol	81.73	42.93
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	80.77	42.64
Bra023511.1-P	Field mustard	cytosol	80.77	42.64
Os11t0602600-01	Rice	nucleus	78.85	42.05
Os03t0154700-01	Rice	mitochondrion	78.85	42.05
KRH03454	Soybean	mitochondrion	78.85	41.62
VIT_17s0000g05970.t01	Wine grape	cytosol	78.85	41.62
VIT_14s0108g00460.t01	Wine grape	cytosol	78.85	41.62
KRH56926	Soybean	mitochondrion	78.85	41.62
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	77.88	41.12
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	77.88	41.12
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	77.88	41.12
Solyc05g007250.2.1	Tomato	nucleus	77.88	41.12
VIT_01s0026g02110.t01	Wine grape	cytosol	77.88	41.12
PGSC0003DMT400007431	Potato	cytosol	76.92	40.61
PGSC0003DMT400059349	Potato	cytosol	76.92	40.61
KRH63367	Soybean	nucleus	76.92	40.61
KRH54535	Soybean	cytosol	76.92	40.61
Os11t0602500-00	Rice	cytosol	78.85	39.23
OQU92521	Sorghum	mitochondrion	73.08	38.19
Os07t0628400-00	Rice	cytosol	32.69	36.56
Zm00001d029340_P003	Maize	cytosol	33.65	25.18

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	ProteinID:BAF12150.1	ProteinID:BAS84437.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843
GO:GO:0022627	GO:GO:0045903	InterPro:IPR002942	InterPro:IPR036986	EnsemblPlantsGene:Os03g0379500	EnsemblPlants:Os03t0379500-01
PANTHER:PTHR11831	PANTHER:PTHR11831:SF21	UniProt:Q0DRI8	InterPro:Ribosomal_S4/S9	InterPro:Ribosomal_S4/S9_euk/arc	InterPro:S4_RNA-bd
InterPro:S4_RNA-bd_sf	SUPFAM:SSF55174	TIGRFAMs:TIGR01018	UniParc:UPI0000E120AA	:	:

Description

Similar to 40S ribosomal protein S9. (Os03t0379500-01)

Coordinates

chr3:+:15005895..15008257

Molecular Weight (calculated)

12103.9 Da

IEP (calculated)

10.545

GRAVY (calculated)

-0.186

Length

104 amino acids

Sequence
(BLAST)

001: ALSPIRNAAR ELLTLDEKNP RRIFEGEALL RHMNRYGLLG EGQNKLDYVL ALTVENFLQC RLQTIVFKNG TVKSIHHDHV LIRQHHIRVG RQLVNIPLFM
101: VRLD

Best Arabidopsis Sequence Match ( AT5G15200.1 )
(BLAST)

001: MVHVCYYRNY GKTFKGPRRP YEKERLDSEL KLVGEYGLRN KRELWRVQYS LSRIRNAARD LLTLDEKSPR RIFEGEALLR RMNRYGLLDE SQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHSRVL IRQRHIRVGK QLVNIPSFMV RLDSQKHIDF ALTSPFGGGR PGRVKRRNEK SASKKASGGG DADGDDEE

Arabidopsis Description

RPS9B40S ribosomal protein S9-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.