Factsheet for Os11t0602500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0154700-01	Rice	mitochondrion	89.47	95.9
Os11t0602600-01	Rice	nucleus	89.47	95.9
GSMUA_Achr8P10060_001	Banana	cytosol	78.95	83.76
GSMUA_Achr2P06950_001	Banana	cytosol	78.95	83.76
GSMUA_Achr1P13080_001	Banana	plasma membrane	78.95	83.76
GSMUA_Achr8P30200_001	Banana	cytosol	78.47	83.25
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	78.47	83.25
KRH03454	Soybean	mitochondrion	77.51	82.23
KRH56926	Soybean	mitochondrion	77.51	82.23
Solyc01g010540.2.1	Tomato	cytosol, mitochondrion	77.51	82.23
Solyc01g010580.2.1	Tomato	cytosol, mitochondrion	77.51	82.23
Solyc04g005680.2.1	Tomato	nucleus, plastid, unclear	77.51	82.23
PGSC0003DMT400007431	Potato	cytosol	77.03	81.73
PGSC0003DMT400059349	Potato	cytosol	77.03	81.73
Solyc05g007250.2.1	Tomato	nucleus	77.03	81.73
VIT_14s0108g00460.t01	Wine grape	cytosol	77.03	81.73
VIT_17s0000g05970.t01	Wine grape	cytosol	77.03	81.73
VIT_01s0026g02110.t01	Wine grape	cytosol	76.56	81.22
KRH54535	Soybean	cytosol	76.08	80.71
KRH63367	Soybean	nucleus	76.08	80.71
AT5G39850.1	Thale cress	cytosol, mitochondrion	75.6	80.2
Os03t0379500-01	Rice	cytosol	39.23	78.85
AT5G15200.1	Thale cress	cytosol	72.73	76.77
CDX91003	Canola	cytosol	71.77	76.14
CDX85559	Canola	extracellular	71.77	76.14
CDX85058	Canola	cytosol	71.77	76.14
CDX78618	Canola	cytosol	71.77	76.14
CDX70599	Canola	cytosol	71.77	76.14
CDX69542	Canola	cytosol	71.77	76.14
Bra008713.1-P	Field mustard	cytosol	71.77	76.14
Bra006289.1-P	Field mustard	cytosol	71.77	76.14
Bra023511.1-P	Field mustard	cytosol	69.86	74.11
Os07t0628400-00	Rice	cytosol	31.58	70.97

Protein Annotations

MapMan:17.1.3.1.10	Gene3D:3.10.290.10	UniProt:A0A0P0Y445	ProteinID:BAT14765.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0019843
GO:GO:0022627	GO:GO:0045903	InterPro:IPR002942	InterPro:IPR036986	EnsemblPlantsGene:Os11g0602500	EnsemblPlants:Os11t0602500-00
PFAM:PF00163	PFAM:PF01479	ScanProsite:PS00632	PFscan:PS50889	PANTHER:PTHR11831	PANTHER:PTHR11831:SF16
InterPro:Ribosomal_S4/S9	InterPro:Ribosomal_S4/S9_N	InterPro:Ribosomal_S4/S9_euk/arc	InterPro:Ribosomal_S4_CS	InterPro:S4_RNA-bd	InterPro:S4_RNA-bd_sf
SMART:SM00363	SMART:SM01390	SUPFAM:SSF55174	TIGRFAMs:TIGR01018	UniParc:UPI000393B52E	SEG:seg

Description

Similar to 40S ribosomal protein S9. (Os11t0602500-00)

Coordinates

chr11:+:23181023..23182739

Molecular Weight (calculated)

24150.3 Da

IEP (calculated)

10.558

GRAVY (calculated)

-0.574

Length

209 amino acids

Sequence
(BLAST)

001: TTILSTVVSF SVKCYEQIYY FIADGKTFKK PRRPYEKERL DAELKLVGEY GLRCKRELWR VQYALSRIRN NARHLLTLDE KNPRRIFEGE ALLRRMNRYG
101: LLADGQNKLD YVLALTVENF LARRLQTLVF KAGMAKSIHH ARVLIRQRHI RVGRQIVNIP SFMVRVESEK HIDFSLTSPF GGGPPGRVKR KNQKKASGGG
201: GDGEEEDEE

Best Arabidopsis Sequence Match ( AT5G39850.1 )
(BLAST)

001: MVNVRFYRNY GKTFKKPRRP YEKERLDAEL KLVGEYGLRC KRELWRVQYT LSRIRNAARE LLTLDEKNPR RIFEGEALLR RMNRYGLLDE TQNKLDYVLA
101: LTVENFLERR LQTIVFKSGM AKSIHHARVL IRQRHIRVGR QLVNIPSFMV RVESQKHVDF SLTSPFGGGR PGRVKRRNER AGAKKASGGD GDEDDEE

Arabidopsis Description

RPS9C40S ribosomal protein S9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLF0]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.