Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0837300-02 | |
| Os04t0429800-01 | |
| Os04t0594400-01 | |
| Os04t0624800-01 | |
| Os06t0112400-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G530800.1 | Wheat | cytosol | 82.06 | 82.06 |
| TraesCS5D01G529500.1 | Wheat | cytosol | 82.51 | 81.78 |
| TraesCS4A01G343500.1 | Wheat | cytosol | 82.06 | 81.33 |
| CDY50888 | Canola | cytosol | 75.34 | 77.42 |
| Bra020006.1-P | Field mustard | cytosol | 74.89 | 76.96 |
| CDX93495 | Canola | cytosol | 74.89 | 76.96 |
| VIT_12s0035g01140.t01 | Wine grape | extracellular | 73.99 | 76.74 |
| PGSC0003DMT400064102 | Potato | cytosol | 73.09 | 76.17 |
| Solyc01g103380.2.1 | Tomato | nucleus | 73.09 | 76.17 |
| AT1G09630.1 | Thale cress | cytosol | 73.54 | 75.58 |
| GSMUA_Achr6P28910_001 | Banana | cytosol | 73.09 | 75.12 |
| KRH06049 | Soybean | endoplasmic reticulum | 72.65 | 75.0 |
| GSMUA_Achr2P05630_001 | Banana | cytosol | 72.2 | 74.88 |
| GSMUA_Achr6P18430_001 | Banana | cytosol | 75.34 | 74.67 |
| KRH26288 | Soybean | endoplasmic reticulum | 72.2 | 74.19 |
| Solyc10g045550.1.1 | Tomato | nucleus | 71.3 | 73.95 |
| Os03t0823700-01 | Rice | plasma membrane | 70.4 | 73.02 |
| Zm00001d034803_P001 | Maize | cytosol | 75.78 | 72.22 |
| Zm00001d034802_P001 | Maize | cytosol | 75.34 | 71.79 |
| Os01t0848700-01 | Rice | cytosol, plasma membrane | 68.61 | 70.83 |
| EER90540 | Sorghum | cytosol | 74.89 | 70.76 |
| Os05t0105100-01 | Rice | golgi, plasma membrane | 69.51 | 70.45 |
| Os09t0327100-01 | Rice | plasma membrane | 67.26 | 69.44 |
| Os06t0551400-01 | Rice | cytosol, golgi, plasma membrane, plastid | 66.82 | 68.66 |
| Os05t0564400-02 | Rice | plasma membrane | 65.02 | 66.82 |
| PGSC0003DMT400045950 | Potato | cytosol | 71.75 | 62.75 |
| Os10t0377400-01 | Rice | cytosol | 58.3 | 60.19 |
| HORVU5Hr1G120210.4 | Barley | plastid | 82.06 | 57.91 |
| Os06t0714600-01 | Rice | cytosol | 52.02 | 51.56 |
| Os09t0527600-01 | Rice | cytosol, plasma membrane | 53.36 | 49.79 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:4334746 | ProteinID:AAS07348.1 | ProteinID:ABF99828.1 | EMBL:AK104362 |
| EMBL:AK104527 | EMBL:AK111499 | ProteinID:BAF13774.1 | ProteinID:BAS87312.1 | ProteinID:EEE60278.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0016787 | EnsemblPlantsGene:Os03g0843100 |
| EnsemblPlants:Os03t0843100-01 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF564 | UniProt:Q75LE2 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0000239479 | RefSeq:XP_015629707.1 |
| SEG:seg | : | : | : | : | : |
Description
small GTP-binding protein OsRab11A1Ras GTPase family protein. (Os03t0843100-01);Ras GTPase family protein. (Os03t0843100-02)
Coordinates
chr3:-:35432741..35434589
Molecular Weight (calculated)
24483.9 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.176
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRPAPWEQ GGDEYDYLFK IVLIGDSGVG KSNLLSRFTR NSFSLDSKST IGVEFATRTI QVEGKIVKAQ IWDTAGQERY RAITSAYYRG AVGALLVYDV
101: TKATTFENVK RWLKELRDHA DSNIVVMLIG NKIDLKHLRS VSLEDATSFA EREGLSFVET SALDATNVDK AFQTVLTEIY RIISKKALAA DEAGAGAGAV
201: REGQSIQVSA TDSSSFTSRC CSF
101: TKATTFENVK RWLKELRDHA DSNIVVMLIG NKIDLKHLRS VSLEDATSFA EREGLSFVET SALDATNVDK AFQTVLTEIY RIISKKALAA DEAGAGAGAV
201: REGQSIQVSA TDSSSFTSRC CSF
001: MARRPDEEYD YLFKVVLIGD SGVGKSNLLS RFTRNEFCLE SKSTIGVEFA TRTLQVEGRT VKAQIWDTAG QERYRAITSA YYRGALGALL VYDVTKPTTF
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
Arabidopsis Description
RABA2ARas-related protein RABA2a [Source:UniProtKB/Swiss-Prot;Acc:O04486]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.