Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93495 | Canola | cytosol | 97.23 | 97.23 |
| CDY50888 | Canola | cytosol | 96.77 | 96.77 |
| Bra020006.1-P | Field mustard | cytosol | 96.31 | 96.31 |
| VIT_12s0035g01140.t01 | Wine grape | extracellular | 89.4 | 90.23 |
| KRH06049 | Soybean | endoplasmic reticulum | 88.94 | 89.35 |
| KRH26288 | Soybean | endoplasmic reticulum | 87.56 | 87.56 |
| Solyc10g045550.1.1 | Tomato | nucleus | 86.64 | 87.44 |
| GSMUA_Achr2P05630_001 | Banana | cytosol | 84.33 | 85.12 |
| GSMUA_Achr6P28910_001 | Banana | cytosol | 83.87 | 83.87 |
| OQU77196 | Sorghum | cytosol | 78.8 | 77.73 |
| GSMUA_Achr6P18430_001 | Banana | cytosol | 80.18 | 77.33 |
| Os05t0105100-01 | Rice | golgi, plasma membrane | 78.34 | 77.27 |
| HORVU1Hr1G001920.2 | Barley | cytosol | 79.26 | 76.44 |
| AT1G07410.1 | Thale cress | cytosol | 74.65 | 75.7 |
| AT3G46830.1 | Thale cress | cytosol | 75.12 | 75.12 |
| TraesCS1D01G013300.1 | Wheat | cytosol | 76.5 | 74.44 |
| TraesCS1B01G018900.1 | Wheat | cytosol | 76.5 | 74.44 |
| Os03t0843100-01 | Rice | cytosol | 75.58 | 73.54 |
| TraesCS1A01G015400.1 | Wheat | cytosol | 75.58 | 73.54 |
| PGSC0003DMT400045950 | Potato | cytosol | 86.18 | 73.33 |
| Zm00001d005495_P001 | Maize | extracellular, mitochondrion, plasma membrane | 75.12 | 73.09 |
| AT5G59150.1 | Thale cress | cytosol | 72.81 | 72.81 |
| EER98344 | Sorghum | cytosol | 74.65 | 72.65 |
| TraesCS5B01G530800.1 | Wheat | cytosol | 73.27 | 71.3 |
| TraesCS4A01G343500.1 | Wheat | cytosol | 73.27 | 70.67 |
| TraesCS5D01G529500.1 | Wheat | cytosol | 72.81 | 70.22 |
| AT5G60860.1 | Thale cress | cytosol | 69.59 | 69.59 |
| AT3G15060.1 | Thale cress | cytosol | 68.66 | 68.66 |
| AT1G16920.1 | Thale cress | cytosol | 68.2 | 68.52 |
| AT4G18800.1 | Thale cress | cytosol | 66.82 | 67.76 |
| AT5G45750.1 | Thale cress | cytosol | 66.82 | 67.13 |
| AT1G06400.1 | Thale cress | cytosol | 65.44 | 65.74 |
| AT1G28550.1 | Thale cress | cytosol | 64.52 | 64.22 |
| AT2G33870.1 | Thale cress | cytosol | 64.06 | 63.76 |
| AT4G18430.1 | Thale cress | cytosol | 63.59 | 63.59 |
| Zm00001d034802_P001 | Maize | cytosol | 65.9 | 61.11 |
| Zm00001d034803_P001 | Maize | cytosol | 65.44 | 60.68 |
| AT3G12160.1 | Thale cress | cytosol | 60.83 | 59.46 |
| EER90540 | Sorghum | cytosol | 64.52 | 59.32 |
| AT5G47960.1 | Thale cress | cytosol | 59.45 | 57.85 |
| AT4G39990.1 | Thale cress | cytosol | 58.06 | 56.25 |
| AT5G65270.1 | Thale cress | cytosol | 57.6 | 55.31 |
| AT1G01200.1 | Thale cress | cytosol | 55.76 | 51.05 |
| HORVU5Hr1G120210.4 | Barley | plastid | 73.27 | 50.32 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:837490 | UniProt:A0A178WCS3 | ProteinID:AAB60720.1 | ProteinID:AEE28471.1 |
| ArrayExpress:AT1G09630 | EnsemblPlantsGene:AT1G09630 | RefSeq:AT1G09630 | TAIR:AT1G09630 | RefSeq:AT1G09630-TAIR-G | EnsemblPlants:AT1G09630.1 |
| TAIR:AT1G09630.1 | Symbol:ATRAB11C | EMBL:AY045620 | EMBL:AY085684 | EMBL:AY133657 | GO:GO:0000166 |
| GO:GO:0000911 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009504 |
| GO:GO:0009987 | GO:GO:0010008 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_172434.1 |
| UniProt:O04486 | ProteinID:OAP15173.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009013 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF613 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EMBL:U74669 | UniParc:UPI0000000BA6 | : | : |
Description
RABA2ARas-related protein RABA2a [Source:UniProtKB/Swiss-Prot;Acc:O04486]
Coordinates
chr1:-:3118155..3119815
Molecular Weight (calculated)
24109.5 Da
IEP (calculated)
6.541
GRAVY (calculated)
-0.335
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRPDEEYD YLFKVVLIGD SGVGKSNLLS RFTRNEFCLE SKSTIGVEFA TRTLQVEGRT VKAQIWDTAG QERYRAITSA YYRGALGALL VYDVTKPTTF
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.