Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001581.1-P | Field mustard | cytosol | 94.01 | 93.58 |
| CDX82451 | Canola | cytosol | 93.55 | 93.12 |
| AT5G60860.1 | Thale cress | cytosol | 92.63 | 92.63 |
| CDX75804 | Canola | cytosol | 92.63 | 92.2 |
| CDY20100 | Canola | cytosol | 91.24 | 90.83 |
| Bra021589.1-P | Field mustard | cytosol | 91.24 | 90.83 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 90.32 | 90.32 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 89.4 | 89.4 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 88.94 | 89.35 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 88.94 | 89.35 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 88.48 | 88.89 |
| KRH50137 | Soybean | cytosol, mitochondrion | 88.48 | 88.48 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 88.02 | 88.43 |
| EES19950 | Sorghum | cytosol | 88.02 | 88.43 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 88.02 | 88.43 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 88.02 | 88.43 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 88.02 | 88.43 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 88.02 | 88.43 |
| Os05t0564400-02 | Rice | plasma membrane | 88.02 | 88.02 |
| OQU89311 | Sorghum | cytosol | 87.56 | 87.96 |
| Os09t0327100-01 | Rice | plasma membrane | 87.56 | 87.96 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 87.56 | 87.96 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 87.56 | 87.96 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 87.1 | 87.5 |
| KRH30863 | Soybean | cytosol | 87.1 | 87.1 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 86.18 | 86.57 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 85.71 | 85.71 |
| AT1G28550.1 | Thale cress | cytosol | 85.71 | 85.32 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 84.79 | 85.19 |
| AT2G33870.1 | Thale cress | cytosol | 85.25 | 84.86 |
| PGSC0003DMT400033395 | Potato | cytosol | 84.33 | 84.72 |
| Solyc03g006270.2.1 | Tomato | cytosol | 83.87 | 84.26 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 83.41 | 83.8 |
| PGSC0003DMT400058784 | Potato | cytosol | 82.95 | 83.72 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 83.41 | 83.41 |
| Solyc10g008840.2.1 | Tomato | cytosol | 82.49 | 83.26 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 82.03 | 82.41 |
| AT4G18430.1 | Thale cress | cytosol | 81.57 | 81.57 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 70.51 | 80.53 |
| AT4G18800.1 | Thale cress | cytosol | 79.26 | 80.37 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 77.88 | 77.52 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 77.88 | 77.52 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 70.97 | 77.0 |
| AT5G45750.1 | Thale cress | cytosol | 76.5 | 76.85 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 67.28 | 76.04 |
| AT1G16920.1 | Thale cress | cytosol | 74.19 | 74.54 |
| Zm00001d043935_P001 | Maize | cytosol | 75.12 | 74.09 |
| OQU87300 | Sorghum | cytosol | 74.19 | 73.52 |
| AT1G06400.1 | Thale cress | cytosol | 71.89 | 72.22 |
| AT1G09630.1 | Thale cress | cytosol | 68.66 | 68.66 |
| AT1G07410.1 | Thale cress | cytosol | 65.9 | 66.82 |
| AT5G59150.1 | Thale cress | cytosol | 66.36 | 66.36 |
| AT3G46830.1 | Thale cress | cytosol | 65.44 | 65.44 |
| AT3G12160.1 | Thale cress | cytosol | 59.45 | 58.11 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 67.74 | 58.1 |
| AT5G47960.1 | Thale cress | cytosol | 58.99 | 57.4 |
| AT4G39990.1 | Thale cress | cytosol | 56.22 | 54.46 |
| AT5G65270.1 | Thale cress | cytosol | 55.76 | 53.54 |
| AT1G01200.1 | Thale cress | cytosol | 53.92 | 49.37 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 77.88 | 48.84 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:820735 | UniProt:A0A178VIU7 | ProteinID:AEE75611.1 | EMBL:AK118727 |
| ArrayExpress:AT3G15060 | EnsemblPlantsGene:AT3G15060 | RefSeq:AT3G15060 | TAIR:AT3G15060 | RefSeq:AT3G15060-TAIR-G | EnsemblPlants:AT3G15060.1 |
| TAIR:AT3G15060.1 | Symbol:AtRABA1g | ProteinID:BAA97069.1 | EMBL:BT005565 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0042546 | GO:GO:0046686 |
| RefSeq:NP_188124.1 | ProteinID:OAP04953.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF842 |
| UniProt:Q9LK99 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000000C6AE | : | : |
Description
RABA1GRas-related protein RABA1g [Source:UniProtKB/Swiss-Prot;Acc:Q9LK99]
Coordinates
chr3:+:5069104..5070540
Molecular Weight (calculated)
24284.6 Da
IEP (calculated)
5.695
GRAVY (calculated)
-0.279
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDEK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
201: GSKDDVSEVK KVGCCSS
101: FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
201: GSKDDVSEVK KVGCCSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.