Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032424.1-P | Field mustard | cytosol | 93.52 | 90.58 |
| CDY06210 | Canola | cytosol | 93.52 | 90.58 |
| CDY09976 | Canola | cytosol | 93.06 | 90.13 |
| KRH22259 | Soybean | cytosol, nucleus | 81.48 | 80.73 |
| KRH27074 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 81.48 | 80.73 |
| Solyc07g055290.2.1 | Tomato | plastid | 79.63 | 78.9 |
| AT5G45750.1 | Thale cress | cytosol | 77.31 | 77.31 |
| AT1G16920.1 | Thale cress | cytosol | 77.31 | 77.31 |
| AT4G18800.1 | Thale cress | cytosol | 76.39 | 77.1 |
| AT5G60860.1 | Thale cress | cytosol | 74.07 | 73.73 |
| AT3G15060.1 | Thale cress | cytosol | 72.22 | 71.89 |
| AT4G18430.1 | Thale cress | cytosol | 69.91 | 69.59 |
| AT1G28550.1 | Thale cress | cytosol | 69.44 | 68.81 |
| AT2G33870.1 | Thale cress | cytosol | 68.52 | 67.89 |
| AT5G59150.1 | Thale cress | cytosol | 66.67 | 66.36 |
| AT3G46830.1 | Thale cress | cytosol | 66.2 | 65.9 |
| AT1G09630.1 | Thale cress | cytosol | 65.74 | 65.44 |
| AT1G07410.1 | Thale cress | cytosol | 64.81 | 65.42 |
| AT3G12160.1 | Thale cress | cytosol | 58.33 | 56.76 |
| AT5G47960.1 | Thale cress | cytosol | 57.41 | 55.61 |
| AT4G39990.1 | Thale cress | cytosol | 56.48 | 54.46 |
| AT5G65270.1 | Thale cress | cytosol | 55.56 | 53.1 |
| AT1G01200.1 | Thale cress | cytosol | 51.85 | 47.26 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:837151 | UniProt:A0A178W910 | ProteinID:AAF82168.1 | ProteinID:AEE27982.1 |
| EMBL:AF332428 | Symbol:ARA2 | ArrayExpress:AT1G06400 | EnsemblPlantsGene:AT1G06400 | RefSeq:AT1G06400 | TAIR:AT1G06400 |
| RefSeq:AT1G06400-TAIR-G | EnsemblPlants:AT1G06400.1 | TAIR:AT1G06400.1 | EMBL:AY065306 | EMBL:AY096439 | EMBL:D01024 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0042546 | RefSeq:NP_172128.1 | ProteinID:OAP13883.1 | InterPro:P-loop_NTPase |
| UniProt:P28185 | PFAM:PF00071 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000016D9 | SEG:seg | : | : |
Description
RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
Coordinates
chr1:-:1950596..1952880
Molecular Weight (calculated)
23928.4 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.305
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.