Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011818.1-P | Field mustard | cytosol | 91.07 | 91.48 |
| CDY69836 | Canola | cytosol | 91.07 | 91.07 |
| AT5G65270.1 | Thale cress | cytosol | 79.91 | 79.2 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 78.57 | 76.86 |
| GSMUA_Achr3P01690_001 | Banana | cytosol | 74.55 | 76.26 |
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 73.66 | 76.04 |
| Os10t0377400-01 | Rice | cytosol | 72.77 | 75.46 |
| GSMUA_Achr3P21290_001 | Banana | cytosol | 72.77 | 74.43 |
| GSMUA_Achr8P18090_001 | Banana | cytosol | 72.32 | 74.31 |
| OQU91938 | Sorghum | cytosol | 71.88 | 74.19 |
| TraesCS1D01G136900.1 | Wheat | cytosol | 71.43 | 74.07 |
| TraesCS1B01G152100.1 | Wheat | cytosol | 71.43 | 74.07 |
| TraesCS1A01G131500.2 | Wheat | cytosol | 71.43 | 74.07 |
| Zm00001d028002_P001 | Maize | mitochondrion | 70.54 | 72.81 |
| EER92725 | Sorghum | cytosol | 70.54 | 72.81 |
| Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 70.09 | 72.35 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 75.0 | 70.89 |
| AT5G47960.1 | Thale cress | cytosol | 66.96 | 67.26 |
| AT3G12160.1 | Thale cress | cytosol | 66.07 | 66.67 |
| AT4G18800.1 | Thale cress | cytosol | 57.59 | 60.28 |
| AT5G45750.1 | Thale cress | cytosol | 57.59 | 59.72 |
| AT1G07410.1 | Thale cress | cytosol | 56.25 | 58.88 |
| AT1G16920.1 | Thale cress | cytosol | 56.25 | 58.33 |
| AT1G09630.1 | Thale cress | cytosol | 56.25 | 58.06 |
| AT3G46830.1 | Thale cress | cytosol | 55.8 | 57.6 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 70.09 | 57.51 |
| AT5G60860.1 | Thale cress | cytosol | 54.91 | 56.68 |
| AT1G06400.1 | Thale cress | cytosol | 54.46 | 56.48 |
| AT1G28550.1 | Thale cress | cytosol | 54.91 | 56.42 |
| AT5G59150.1 | Thale cress | cytosol | 54.46 | 56.22 |
| AT3G15060.1 | Thale cress | cytosol | 54.46 | 56.22 |
| AT4G18430.1 | Thale cress | cytosol | 53.57 | 55.3 |
| AT2G33870.1 | Thale cress | cytosol | 53.57 | 55.05 |
| AT1G01200.1 | Thale cress | cytosol | 58.04 | 54.85 |
| CDX69369 | Canola | cytosol | 89.73 | 49.26 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:830160 | ProteinID:AEE87150.1 | ArrayExpress:AT4G39990 | EnsemblPlantsGene:AT4G39990 |
| RefSeq:AT4G39990 | TAIR:AT4G39990 | RefSeq:AT4G39990-TAIR-G | EnsemblPlants:AT4G39990.1 | TAIR:AT4G39990.1 | Symbol:ATRABA4B |
| EMBL:AY072448 | EMBL:AY088624 | EMBL:AY128914 | Unigene:At.1649 | ProteinID:CAB38912.1 | ProteinID:CAB80662.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019900 | GO:GO:0031901 | GO:GO:0032456 | GO:GO:0032588 |
| GO:GO:0035619 | GO:GO:0042546 | RefSeq:NP_195709.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | UniProt:Q9SMQ6 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EMBL:U46926 | UniParc:UPI00000AB17D | SEG:seg | : |
Description
RABA4BRas-related protein RABA4b [Source:UniProtKB/Swiss-Prot;Acc:Q9SMQ6]
Coordinates
chr4:+:18542551..18543978
Molecular Weight (calculated)
24407.9 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.326
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGGYGGA SGKVDYVFKV VLIGDSAVGK SQLLARFARD EFSMDSKATI GVEFQTRTLS IEQKSIKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDMT
101: KRETFEHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAV PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTQIYN TVNKKNLASE GDSNNPGSLA
201: GKKILIPGSG QEIPAKTSTC CTSS
101: KRETFEHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAV PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTQIYN TVNKKNLASE GDSNNPGSLA
201: GKKILIPGSG QEIPAKTSTC CTSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.