Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G28550.1 | Thale cress | cytosol | 92.66 | 92.66 |
| CDX79548 | Canola | cytosol | 83.49 | 92.39 |
| Bra022959.1-P | Field mustard | cytosol | 91.74 | 91.74 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 87.16 | 87.56 |
| KRH50137 | Soybean | cytosol, mitochondrion | 86.7 | 87.1 |
| AT5G60860.1 | Thale cress | cytosol | 86.24 | 86.64 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 85.78 | 86.18 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 85.32 | 86.11 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 85.32 | 86.11 |
| OQU89311 | Sorghum | cytosol | 84.86 | 85.65 |
| Os09t0327100-01 | Rice | plasma membrane | 84.86 | 85.65 |
| AT3G15060.1 | Thale cress | cytosol | 84.86 | 85.25 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 84.4 | 85.19 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 84.4 | 85.19 |
| KRH30863 | Soybean | cytosol | 84.4 | 84.79 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 84.4 | 84.79 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 83.94 | 84.72 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 83.49 | 84.26 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 83.49 | 84.26 |
| EES19950 | Sorghum | cytosol | 83.49 | 84.26 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 83.49 | 84.26 |
| Solyc10g008840.2.1 | Tomato | cytosol | 83.03 | 84.19 |
| PGSC0003DMT400058784 | Potato | cytosol | 83.03 | 84.19 |
| Os05t0564400-02 | Rice | plasma membrane | 83.49 | 83.87 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 83.03 | 83.8 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 83.03 | 83.8 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 82.57 | 83.33 |
| PGSC0003DMT400033395 | Potato | cytosol | 82.11 | 82.87 |
| Solyc03g006270.2.1 | Tomato | cytosol | 81.65 | 82.41 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 81.19 | 81.94 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 81.19 | 81.94 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 81.19 | 81.94 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 80.28 | 80.65 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 78.9 | 79.63 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 69.27 | 79.47 |
| AT4G18430.1 | Thale cress | cytosol | 78.9 | 79.26 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 71.1 | 77.5 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 67.89 | 77.08 |
| AT4G18800.1 | Thale cress | cytosol | 75.23 | 76.64 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 75.23 | 75.23 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 75.23 | 75.23 |
| AT5G45750.1 | Thale cress | cytosol | 73.39 | 74.07 |
| AT1G16920.1 | Thale cress | cytosol | 71.56 | 72.22 |
| Zm00001d043935_P001 | Maize | cytosol | 71.56 | 70.91 |
| OQU87300 | Sorghum | cytosol | 71.1 | 70.78 |
| AT1G06400.1 | Thale cress | cytosol | 67.89 | 68.52 |
| AT5G59150.1 | Thale cress | cytosol | 65.14 | 65.44 |
| AT1G07410.1 | Thale cress | cytosol | 63.3 | 64.49 |
| AT1G09630.1 | Thale cress | cytosol | 63.76 | 64.06 |
| AT3G46830.1 | Thale cress | cytosol | 62.84 | 63.13 |
| AT3G12160.1 | Thale cress | cytosol | 58.26 | 57.21 |
| AT5G47960.1 | Thale cress | cytosol | 58.26 | 56.95 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 63.76 | 54.94 |
| AT4G39990.1 | Thale cress | cytosol | 55.05 | 53.57 |
| AT5G65270.1 | Thale cress | cytosol | 55.05 | 53.1 |
| AT1G01200.1 | Thale cress | cytosol | 52.75 | 48.52 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 75.23 | 47.4 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:817957 | UniProt:A0A178W1D1 | ProteinID:AAC69136.1 | ProteinID:AEC08901.1 |
| ArrayExpress:AT2G33870 | EnsemblPlantsGene:AT2G33870 | RefSeq:AT2G33870 | TAIR:AT2G33870 | RefSeq:AT2G33870-TAIR-G | EnsemblPlants:AT2G33870.1 |
| TAIR:AT2G33870.1 | Symbol:ArRABA1h | EMBL:DQ446594 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_180943.4 |
| ProteinID:OAP10912.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007616 |
| PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF649 | UniProt:Q1PEX3 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0000D5BC8D | : |
Description
RABA1HArRABA1h [Source:UniProtKB/TrEMBL;Acc:A0A178W1D1]
Coordinates
chr2:-:14337198..14338385
Molecular Weight (calculated)
24338.6 Da
IEP (calculated)
5.152
GRAVY (calculated)
-0.347
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTYKAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRSTIGVEF ATRSIQVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANTV IMLVGNKADL NHLRAISTEE VKDFAERENT FFMETSALEA INVENAFTEV LTQIYRVVSK KALDAGDDPT TALPKGQMIN
201: VGSRDDVSAV KKSGCCAT
101: FENVERWLKE LRDHTDANTV IMLVGNKADL NHLRAISTEE VKDFAERENT FFMETSALEA INVENAFTEV LTQIYRVVSK KALDAGDDPT TALPKGQMIN
201: VGSRDDVSAV KKSGCCAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.