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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G185700.1
TraesCS3B01G215300.1
TraesCS3D01G189700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60860.1 TraesCS3A01G185700.1 AT3G06540.1 21798944
AT5G60860.1 TraesCS3B01G215300.1 AT3G06540.1 21798944
AT5G60860.1 TraesCS3D01G189700.1 AT3G06540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G188900.1 Wheat cytosol 99.54 99.54
HORVU5Hr1G056470.1 Barley cytosol, plasma membrane 98.61 98.61
TraesCS5A01G184100.1 Wheat golgi, plastid 98.61 98.61
OQU89311 Sorghum cytosol 97.22 97.22
Os09t0327100-01 Rice plasma membrane 97.22 97.22
TraesCS7B01G200600.1 Wheat cytosol 96.76 96.76
TraesCS1B01G426300.1 Wheat cytosol 92.59 92.59
VIT_19s0014g01820.t01 Wine grape cytosol 92.59 92.17
VIT_10s0003g00550.t01 Wine grape cytosol 92.13 91.71
Solyc07g053480.2.1 Tomato cytosol, plastid 91.2 90.78
PGSC0003DMT400024319 Potato cytosol 91.2 90.78
AT5G60860.1 Thale cress cytosol 91.2 90.78
KRH20359 Soybean cytosol, endoplasmic reticulum 90.74 90.32
PGSC0003DMT400020208 Potato cytosol 90.28 89.86
KRH25681 Soybean cytosol 90.28 89.86
Solyc12g010790.1.1 Tomato cytosol, nucleus, unclear 89.81 89.4
KRH55839 Soybean endoplasmic reticulum 89.35 88.94
KRH50137 Soybean cytosol, mitochondrion 89.35 88.94
KRH30863 Soybean cytosol 88.89 88.48
AT3G15060.1 Thale cress cytosol 88.43 88.02
CDX75804 Canola cytosol 88.43 87.61
Bra001581.1-P Field mustard cytosol 88.43 87.61
CDX82451 Canola cytosol 88.43 87.61
KRH32712 Soybean cytosol, endoplasmic reticulum, mitochondrion 87.96 87.56
Bra032914.1-P Field mustard cytosol 87.96 87.16
CDY30818 Canola cytosol 87.96 87.16
CDY34094 Canola cytosol 87.96 87.16
Solyc12g014080.1.1 Tomato cytosol 87.5 87.1
PGSC0003DMT400039780 Potato cytosol, mitochondrion 87.04 86.64
Bra010860.1-P Field mustard cytosol 86.11 86.51
CDX90160 Canola cytosol 86.11 86.51
CDX94631 Canola cytosol 87.04 86.24
Bra030105.1-P Field mustard cytosol 87.04 86.24
CDY35757 Canola cytosol 87.04 86.24
AT1G28550.1 Thale cress cytosol 86.57 85.78
CDY15659 Canola cytosol 86.57 85.78
VIT_12s0028g02650.t01 Wine grape cytosol 85.65 85.65
CDX79548 Canola cytosol 77.78 85.28
PGSC0003DMT400058784 Potato cytosol 84.72 85.12
PGSC0003DMT400033395 Potato cytosol 84.72 84.72
Solyc10g008840.2.1 Tomato cytosol 84.26 84.65
AT2G33870.1 Thale cress cytosol 85.19 84.4
Solyc03g006270.2.1 Tomato cytosol 84.26 84.26
Bra021589.1-P Field mustard cytosol 84.72 83.94
CDY20100 Canola cytosol 84.72 83.94
Bra022959.1-P Field mustard cytosol 84.26 83.49
GSMUA_Achr7P14790_001 Banana cytosol 71.3 80.21
TraesCS7B01G273300.1 Wheat plastid 80.09 79.72
AT4G18430.1 Thale cress cytosol 80.09 79.72
CDY01540 Canola cytosol 79.63 79.26
CDY55638 Canola cytosol 79.63 79.26
Bra012597.1-P Field mustard cytosol 79.17 78.8
CDX76522 Canola cytosol 78.7 78.34
KRH27001 Soybean cytosol, endoplasmic reticulum 78.7 77.98
Bra021009.1-P Field mustard cytosol 78.24 77.88
KRH22324 Soybean cytosol, endoplasmic reticulum 77.78 77.06
TraesCS3B01G324300.1 Wheat cytosol, golgi 75.46 73.76
CDY60884 Canola cytosol 74.54 72.2
TraesCS3B01G396200.1 Wheat cytosol, golgi 66.2 66.2
TraesCS5B01G530800.1 Wheat cytosol 68.06 65.92
TraesCS1B01G018900.1 Wheat cytosol 68.06 65.92
TraesCS5B01G498600.1 Wheat cytosol, plastid 65.28 65.58
TraesCS1B01G150900.1 Wheat cytosol 62.04 61.75
TraesCS1B01G152100.1 Wheat cytosol 59.26 59.26
GSMUA_Achr7P10970_001 Banana cytosol 67.13 57.31
TraesCS5B01G171900.1 Wheat cytosol 59.72 57.08
TraesCS7B01G287900.1 Wheat cytosol 54.17 52.23
TraesCS3B01G272300.1 Wheat cytosol 82.41 51.45
TraesCS5B01G316300.1 Wheat cytosol 55.09 47.98
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF346SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231EnsemblPlantsGene:TraesCS5B01G182200
EnsemblPlants:TraesCS5B01G182200.1TIGR:cd01868::::
Description
No Description!
Coordinates
chr5B:-:332200899..332203001
Molecular Weight (calculated)
24030.5 Da
IEP (calculated)
5.799
GRAVY (calculated)
-0.200
Length
216 amino acids
Sequence
(BLAST)
001: MAYRAEDDYD YLFKVVLIGD SGVGKSNLLS RFTRNEFSLE SKSTIGVEFA TRSIRVDDKV VKAQIWDTAG QERYRAITSA YYRGAVGALV VYDVTRHVTF
101: ENVERWLKEL RDHTDANIVI MLVGNKADLR HLRAVSVDDA KAFAEREITF FMETSALEAM NVETAFTEVL TQIYRVVSKK ALDIGDDPAA PPRGQTINVG
201: GKDDVSAVKK AGCCSS
Best Arabidopsis Sequence Match ( AT1G28550.1 )
(BLAST)
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
Arabidopsis Description
RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.