CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030105.1-P	Field mustard	cytosol	100.0	100.0
CDY15659	Canola	cytosol	99.54	99.54
CDY35757	Canola	cytosol	99.08	99.08
CDX90160	Canola	cytosol	97.71	99.07
CDY34094	Canola	cytosol	98.17	98.17
CDY30818	Canola	cytosol	98.17	98.17
AT1G28550.1	Thale cress	cytosol	97.71	97.71
CDX79548	Canola	cytosol	82.11	90.86
KRH20359	Soybean	cytosol, endoplasmic reticulum	88.99	89.4
KRH50137	Soybean	cytosol, mitochondrion	87.61	88.02
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	87.16	87.96
TraesCS5A01G184100.1	Wheat	golgi, plastid	87.16	87.96
VIT_10s0003g00550.t01	Wine grape	cytosol	87.16	87.56
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	86.7	87.1
KRH30863	Soybean	cytosol	86.7	87.1
TraesCS5B01G182200.1	Wheat	cytosol	86.24	87.04
TraesCS5D01G188900.1	Wheat	cytosol	86.24	87.04
OQU89311	Sorghum	cytosol	85.78	86.57
Os09t0327100-01	Rice	plasma membrane	85.78	86.57
EES19950	Sorghum	cytosol	84.86	85.65
TraesCS7B01G200600.1	Wheat	cytosol	84.86	85.65
Os05t0564400-02	Rice	plasma membrane	84.86	85.25
TraesCS7D01G289000.1	Wheat	cytosol	84.4	85.19
TraesCS7A01G285200.1	Wheat	cytosol	84.4	85.19
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	83.94	84.72
TraesCS1A01G398400.1	Wheat	cytosol	83.94	84.72
TraesCS1B01G426300.1	Wheat	cytosol	83.49	84.26
TraesCS1D01G405900.1	Wheat	cytosol	83.49	84.26
PGSC0003DMT400058784	Potato	cytosol	83.03	84.19
Solyc10g008840.2.1	Tomato	cytosol	83.03	84.19
PGSC0003DMT400033395	Potato	cytosol	83.03	83.8
GSMUA_Achr3P15540_001	Banana	cytosol	82.57	83.33
Solyc03g006270.2.1	Tomato	cytosol	82.57	83.33
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	82.57	83.33
CDX75804	Canola	cytosol	83.03	83.03
CDX82451	Canola	cytosol	83.03	83.03
GSMUA_Achr4P02760_001	Banana	cytosol	71.56	82.11
GSMUA_Achr5P09130_001	Banana	cytosol	81.19	81.57
GSMUA_Achr1P11940_001	Banana	cytosol	80.73	81.48
GSMUA_Achr8P27180_001	Banana	cytosol	80.73	81.48
CDY20100	Canola	cytosol	80.73	80.73
GSMUA_Achr1P04780_001	Banana	cytosol	72.48	79.0
TraesCS3D01G244500.1	Wheat	cytosol	78.44	78.44
TraesCS3A01G247000.1	Wheat	cytosol	78.44	78.44
CDY01540	Canola	cytosol	77.98	78.34
CDX76522	Canola	cytosol	77.98	78.34
CDY55638	Canola	cytosol	77.98	78.34
CDX99430	Canola	cytosol	75.69	77.1
CDY62557	Canola	cytosol	75.69	76.74
CDY64916	Canola	cytosol	75.23	76.28
GSMUA_Achr7P14790_001	Banana	cytosol	66.06	75.0
CDX87774	Canola	cytosol	72.02	72.69
CDY35128	Canola	cytosol	71.56	72.22
OQU87300	Sorghum	cytosol	72.48	72.15
Zm00001d043935_P001	Maize	cytosol	72.48	71.82
CDX96799	Canola	cytosol	71.1	71.76
CDY60884	Canola	cytosol	72.94	71.3
CDY40023	Canola	cytosol	70.64	71.3
CDY06210	Canola	cytosol	69.72	68.16
CDY09976	Canola	cytosol	69.72	68.16
CDY50888	Canola	cytosol	66.51	66.82
CDY33014	Canola	cytosol	66.51	66.82
CDX93495	Canola	cytosol	66.06	66.36
CDY02867	Canola	cytosol	64.68	64.98
CDY32661	Canola	cytosol	64.68	64.98
CDY06256	Canola	cytosol	62.84	64.02
CDY09919	Canola	cytosol	62.84	64.02
CDY06703	Canola	cytosol	62.84	63.43
CDY71720	Canola	cytosol	61.93	62.21
CDX73833	Canola	cytosol	60.55	59.73
CDY00758	Canola	cytosol	60.55	59.73
CDY50568	Canola	cytosol	60.09	59.01
CDY52622	Canola	cytosol	60.09	59.01
CDX69843	Canola	cytosol	60.09	58.74
CDX86332	Canola	cytosol	60.09	58.74
CDY08447	Canola	cytosol	59.63	58.56
CDY42133	Canola	cytosol	59.63	58.56
CDX96994	Canola	cytosol	59.63	58.3
CDY54519	Canola	cytosol	59.63	58.3
CDX81790	Canola	plastid	71.1	58.05
CDX80299	Canola	cytosol	66.51	56.2
GSMUA_Achr7P10970_001	Banana	cytosol	64.68	55.73
CDY69836	Canola	cytosol	56.88	55.36
CDY18682	Canola	cytosol	56.88	55.11
CDX86101	Canola	cytosol	64.22	54.69
CDX81274	Canola	cytosol	56.88	54.63
TraesCS3B01G272300.1	Wheat	cytosol	78.44	49.42
CDX90017	Canola	cytosol	53.21	48.95
CDY15192	Canola	cytosol	53.21	48.95
CDX99094	Canola	cytosol	64.22	48.78
CDX69367	Canola	cytosol	38.53	45.65
CDX69369	Canola	cytosol	56.88	30.39

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078DZP3	EnsemblPlants:CDX94631	ProteinID:CDX94631	ProteinID:CDX94631.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00157949001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025410B2	:

Description

BnaC07g10270D

Coordinates

chrLK031883:-:475074..475803

Molecular Weight (calculated)

24248.5 Da

IEP (calculated)

5.172

GRAVY (calculated)

-0.319

Length

218 amino acids

Sequence
(BLAST)

001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSN DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA LNVENAFTEV LTEIYRVVSK KALEAGDDPT TALPKGQTIN
201: VGGRDDISAV KKPGCCSA

Best Arabidopsis Sequence Match ( AT1G28550.1 )
(BLAST)

001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA

Arabidopsis Description

RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.