Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- mitochondrion 1
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018190.1-P | Field mustard | cytosol | 84.77 | 100.0 |
| AT3G46830.1 | Thale cress | cytosol | 81.64 | 96.31 |
| CDY33014 | Canola | cytosol | 78.91 | 93.09 |
| CDY32661 | Canola | cytosol | 76.95 | 90.78 |
| CDY02867 | Canola | cytosol | 76.56 | 90.32 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 75.39 | 89.35 |
| PGSC0003DMT400053686 | Potato | cytosol | 75.39 | 89.35 |
| KRH29738 | Soybean | endoplasmic reticulum | 74.61 | 88.43 |
| CDY06703 | Canola | cytosol | 74.61 | 88.43 |
| CDY09919 | Canola | cytosol | 73.83 | 88.32 |
| CDY06256 | Canola | cytosol | 73.83 | 88.32 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 74.22 | 87.96 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 74.22 | 87.56 |
| CDY71720 | Canola | cytosol | 74.22 | 87.56 |
| Solyc06g076450.2.1 | Tomato | plastid | 73.44 | 87.44 |
| PGSC0003DMT400078200 | Potato | cytosol | 73.44 | 87.44 |
| CDX99094 | Canola | cytosol | 95.7 | 85.37 |
| CDX80299 | Canola | cytosol | 82.03 | 81.4 |
| CDY50888 | Canola | cytosol | 62.5 | 73.73 |
| CDX93495 | Canola | cytosol | 62.11 | 73.27 |
| CDY35128 | Canola | cytosol | 57.42 | 68.06 |
| CDY40023 | Canola | cytosol | 57.03 | 67.59 |
| CDX99430 | Canola | cytosol | 55.86 | 66.82 |
| CDX82451 | Canola | cytosol | 56.64 | 66.51 |
| CDY64916 | Canola | cytosol | 55.86 | 66.51 |
| CDY62557 | Canola | cytosol | 55.86 | 66.51 |
| CDX96799 | Canola | cytosol | 55.86 | 66.2 |
| CDX75804 | Canola | cytosol | 55.86 | 65.6 |
| CDX87774 | Canola | cytosol | 55.08 | 65.28 |
| CDY20100 | Canola | cytosol | 55.47 | 65.14 |
| CDX90160 | Canola | cytosol | 54.69 | 65.12 |
| CDY35757 | Canola | cytosol | 55.08 | 64.68 |
| CDY15659 | Canola | cytosol | 55.08 | 64.68 |
| CDX94631 | Canola | cytosol | 54.69 | 64.22 |
| CDY34094 | Canola | cytosol | 54.3 | 63.76 |
| CDY30818 | Canola | cytosol | 54.3 | 63.76 |
| CDY01540 | Canola | cytosol | 53.91 | 63.59 |
| CDY55638 | Canola | cytosol | 53.91 | 63.59 |
| CDX79548 | Canola | cytosol | 48.83 | 63.45 |
| CDY09976 | Canola | cytosol | 55.08 | 63.23 |
| CDY06210 | Canola | cytosol | 55.08 | 63.23 |
| CDX76522 | Canola | cytosol | 53.52 | 63.13 |
| CDX73833 | Canola | cytosol | 51.17 | 59.28 |
| CDY00758 | Canola | cytosol | 51.17 | 59.28 |
| CDY54519 | Canola | cytosol | 51.56 | 59.19 |
| CDX86332 | Canola | cytosol | 51.17 | 58.74 |
| CDY08447 | Canola | cytosol | 50.78 | 58.56 |
| CDY42133 | Canola | cytosol | 50.78 | 58.56 |
| CDY50568 | Canola | cytosol | 50.78 | 58.56 |
| CDY52622 | Canola | cytosol | 50.78 | 58.56 |
| CDY60884 | Canola | cytosol | 50.78 | 58.3 |
| CDX69843 | Canola | cytosol | 50.39 | 57.85 |
| CDX96994 | Canola | cytosol | 50.39 | 57.85 |
| CDY18682 | Canola | cytosol | 50.39 | 57.33 |
| CDY69836 | Canola | cytosol | 49.61 | 56.7 |
| CDX81274 | Canola | cytosol | 50.0 | 56.39 |
| CDX81790 | Canola | plastid | 57.42 | 55.06 |
| CDX69367 | Canola | cytosol | 33.98 | 47.28 |
| CDX90017 | Canola | cytosol | 43.75 | 47.26 |
| CDY15192 | Canola | cytosol | 43.75 | 47.26 |
| CDX69369 | Canola | cytosol | 48.83 | 30.64 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078DA13 | EnsemblPlants:CDX86101 | ProteinID:CDX86101 | ProteinID:CDX86101.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00144134001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EDB2CD |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g56160D
Coordinates
chrLK031844:-:1388953..1390948
Molecular Weight (calculated)
28251.7 Da
IEP (calculated)
7.952
GRAVY (calculated)
-0.204
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLCNFFFFL KQKLSSSLSD LIPPPFFVRK GLIAKSGKEM ANRVDQEYDY LFKIVLIGDS GVGKSNILSR FTRNEFCLES KSTIGVEFAT RTTQVEGKTI
101: KAQIWDTAGQ ERYRAITSAY YRGAVGALLV YDITKRQTFD NALRWLRELR DHADSNIVIM MAGNKSDLNH LRSVAEEDGH NLAEKEGLSF LETSALEATN
201: VEKAFQTILG EIYHIISKKA LAAQEAAAAN SAIPGQGTTI NVDDTSGGVK RGCCST
101: KAQIWDTAGQ ERYRAITSAY YRGAVGALLV YDITKRQTFD NALRWLRELR DHADSNIVIM MAGNKSDLNH LRSVAEEDGH NLAEKEGLSF LETSALEATN
201: VEKAFQTILG EIYHIISKKA LAAQEAAAAN SAIPGQGTTI NVDDTSGGVK RGCCST
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Arabidopsis Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.