Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022959.1-P | Field mustard | cytosol | 98.98 | 89.45 |
| AT2G33870.1 | Thale cress | cytosol | 92.39 | 83.49 |
| CDY30818 | Canola | cytosol | 92.39 | 83.49 |
| CDY34094 | Canola | cytosol | 92.39 | 83.49 |
| CDX90160 | Canola | cytosol | 89.85 | 82.33 |
| CDX94631 | Canola | cytosol | 90.86 | 82.11 |
| CDY35757 | Canola | cytosol | 90.86 | 82.11 |
| CDY15659 | Canola | cytosol | 90.36 | 81.65 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 87.82 | 79.72 |
| KRH50137 | Soybean | cytosol, mitochondrion | 87.31 | 79.26 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 86.8 | 78.8 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 85.28 | 77.78 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 85.28 | 77.78 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 85.28 | 77.78 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 85.28 | 77.78 |
| KRH30863 | Soybean | cytosol | 85.28 | 77.42 |
| OQU89311 | Sorghum | cytosol | 84.77 | 77.31 |
| Os09t0327100-01 | Rice | plasma membrane | 84.77 | 77.31 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 84.26 | 76.85 |
| PGSC0003DMT400058784 | Potato | cytosol | 83.76 | 76.74 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 84.26 | 76.5 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 83.76 | 76.39 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 83.76 | 76.39 |
| Solyc10g008840.2.1 | Tomato | cytosol | 83.25 | 76.28 |
| PGSC0003DMT400033395 | Potato | cytosol | 83.25 | 75.93 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 83.25 | 75.93 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 83.25 | 75.93 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 83.25 | 75.93 |
| EES19950 | Sorghum | cytosol | 82.74 | 75.46 |
| Solyc03g006270.2.1 | Tomato | cytosol | 82.74 | 75.46 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 81.73 | 74.54 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 81.73 | 74.54 |
| Os05t0564400-02 | Rice | plasma membrane | 81.73 | 74.19 |
| CDX82451 | Canola | cytosol | 81.22 | 73.39 |
| CDX75804 | Canola | cytosol | 81.22 | 73.39 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 80.2 | 73.15 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 80.2 | 73.15 |
| CDY20100 | Canola | cytosol | 80.71 | 72.94 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 80.2 | 72.81 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 79.7 | 72.69 |
| CDY01540 | Canola | cytosol | 79.7 | 72.35 |
| CDY55638 | Canola | cytosol | 79.7 | 72.35 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 69.04 | 71.58 |
| CDX76522 | Canola | cytosol | 78.68 | 71.43 |
| CDX99430 | Canola | cytosol | 75.13 | 69.16 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 70.05 | 69.0 |
| CDY62557 | Canola | cytosol | 75.13 | 68.84 |
| CDX96799 | Canola | cytosol | 75.13 | 68.52 |
| CDY64916 | Canola | cytosol | 74.62 | 68.37 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 65.99 | 67.71 |
| CDX87774 | Canola | cytosol | 74.11 | 67.59 |
| CDY35128 | Canola | cytosol | 73.6 | 67.13 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 74.11 | 66.97 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 74.11 | 66.97 |
| CDY40023 | Canola | cytosol | 73.1 | 66.67 |
| CDY60884 | Canola | cytosol | 73.6 | 65.02 |
| OQU87300 | Sorghum | cytosol | 71.07 | 63.93 |
| Zm00001d043935_P001 | Maize | cytosol | 70.56 | 63.18 |
| CDY06210 | Canola | cytosol | 70.05 | 61.88 |
| CDY09976 | Canola | cytosol | 70.05 | 61.88 |
| CDY33014 | Canola | cytosol | 64.97 | 58.99 |
| CDY02867 | Canola | cytosol | 63.96 | 58.06 |
| CDY50888 | Canola | cytosol | 63.96 | 58.06 |
| CDY32661 | Canola | cytosol | 63.96 | 58.06 |
| CDX93495 | Canola | cytosol | 63.45 | 57.6 |
| CDY06256 | Canola | cytosol | 61.93 | 57.01 |
| CDY09919 | Canola | cytosol | 61.93 | 57.01 |
| CDY06703 | Canola | cytosol | 62.44 | 56.94 |
| CDY71720 | Canola | cytosol | 61.42 | 55.76 |
| CDX81790 | Canola | plastid | 75.13 | 55.43 |
| CDX73833 | Canola | cytosol | 57.36 | 51.13 |
| CDY00758 | Canola | cytosol | 57.36 | 51.13 |
| CDX86332 | Canola | cytosol | 57.36 | 50.67 |
| CDY50568 | Canola | cytosol | 56.85 | 50.45 |
| CDY52622 | Canola | cytosol | 56.85 | 50.45 |
| CDY54519 | Canola | cytosol | 56.85 | 50.22 |
| CDY42133 | Canola | cytosol | 56.35 | 50.0 |
| CDY08447 | Canola | cytosol | 56.35 | 50.0 |
| CDX96994 | Canola | cytosol | 56.35 | 49.78 |
| CDX80299 | Canola | cytosol | 64.97 | 49.61 |
| CDX69843 | Canola | cytosol | 55.84 | 49.33 |
| CDX86101 | Canola | cytosol | 63.45 | 48.83 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 62.44 | 48.62 |
| CDY69836 | Canola | cytosol | 53.81 | 47.32 |
| CDY18682 | Canola | cytosol | 53.81 | 47.11 |
| CDX81274 | Canola | cytosol | 53.81 | 46.7 |
| CDX99094 | Canola | cytosol | 63.45 | 43.55 |
| CDX90017 | Canola | cytosol | 52.28 | 43.46 |
| CDY15192 | Canola | cytosol | 52.28 | 43.46 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 74.11 | 42.2 |
| CDX69367 | Canola | cytosol | 34.52 | 36.96 |
| CDX69369 | Canola | cytosol | 53.81 | 25.98 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078CWP1 | EnsemblPlants:CDX79548 | ProteinID:CDX79548 | ProteinID:CDX79548.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00132299001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF649 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EB2819 | : |
Description
BnaC03g18840D
Coordinates
chrLK031818:-:647924..649281
Molecular Weight (calculated)
21907.9 Da
IEP (calculated)
5.764
GRAVY (calculated)
-0.235
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAYKSEDDY DYLFKVVLTG DSGVGKSNLL SRFTKNDFSH DSRSTIGVEF ATRSIKVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRNHTDANIV IMLVERENTF FMETSALEAL NVESAFTEVL TQIYRVVSKN ALEGGVDPTT ALPKGQVINV GSRDDVSAVK KAGCCST
101: FENVERWLKE LRNHTDANIV IMLVERENTF FMETSALEAL NVESAFTEVL TQIYRVVSKN ALEGGVDPTT ALPKGQVINV GSRDDVSAVK KAGCCST
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
Arabidopsis Description
RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.