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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G185700.1
TraesCS3B01G215300.1
TraesCS3D01G189700.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60860.1 TraesCS3A01G185700.1 AT3G06540.1 21798944
AT5G60860.1 TraesCS3B01G215300.1 AT3G06540.1 21798944
AT5G60860.1 TraesCS3D01G189700.1 AT3G06540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G289000.1 Wheat cytosol 99.54 99.54
TraesCS7A01G285200.1 Wheat cytosol 99.54 99.54
TraesCS5B01G182200.1 Wheat cytosol 96.76 96.76
TraesCS1B01G426300.1 Wheat cytosol 94.44 94.44
VIT_10s0003g00550.t01 Wine grape cytosol 92.13 91.71
VIT_19s0014g01820.t01 Wine grape cytosol 91.67 91.24
AT5G60860.1 Thale cress cytosol 91.67 91.24
Solyc07g053480.2.1 Tomato cytosol, plastid 91.67 91.24
PGSC0003DMT400024319 Potato cytosol 91.67 91.24
KRH20359 Soybean cytosol, endoplasmic reticulum 91.2 90.78
PGSC0003DMT400020208 Potato cytosol 89.81 89.4
KRH50137 Soybean cytosol, mitochondrion 89.81 89.4
KRH25681 Soybean cytosol 89.81 89.4
KRH30863 Soybean cytosol 89.35 88.94
Solyc12g010790.1.1 Tomato cytosol, nucleus, unclear 89.35 88.94
KRH55839 Soybean endoplasmic reticulum 89.35 88.94
AT3G15060.1 Thale cress cytosol 88.89 88.48
KRH32712 Soybean cytosol, endoplasmic reticulum, mitochondrion 88.43 88.02
CDX82451 Canola cytosol 88.43 87.61
Bra001581.1-P Field mustard cytosol 88.43 87.61
CDX75804 Canola cytosol 87.5 86.7
Solyc12g014080.1.1 Tomato cytosol 86.57 86.18
Bra032914.1-P Field mustard cytosol 86.57 85.78
CDY30818 Canola cytosol 86.57 85.78
CDY34094 Canola cytosol 86.57 85.78
PGSC0003DMT400039780 Potato cytosol, mitochondrion 86.11 85.71
CDX90160 Canola cytosol 85.19 85.58
Bra010860.1-P Field mustard cytosol 85.19 85.58
CDY35757 Canola cytosol 85.65 84.86
Bra021589.1-P Field mustard cytosol 85.65 84.86
CDY20100 Canola cytosol 85.65 84.86
CDX94631 Canola cytosol 85.65 84.86
Bra030105.1-P Field mustard cytosol 85.65 84.86
VIT_12s0028g02650.t01 Wine grape cytosol 84.72 84.72
AT1G28550.1 Thale cress cytosol 85.19 84.4
CDY15659 Canola cytosol 85.19 84.4
CDX79548 Canola cytosol 76.85 84.26
PGSC0003DMT400033395 Potato cytosol 84.26 84.26
AT2G33870.1 Thale cress cytosol 84.72 83.94
Solyc03g006270.2.1 Tomato cytosol 83.8 83.8
PGSC0003DMT400058784 Potato cytosol 82.87 83.26
Bra022959.1-P Field mustard cytosol 83.8 83.03
Solyc10g008840.2.1 Tomato cytosol 82.41 82.79
GSMUA_Achr7P14790_001 Banana cytosol 72.22 81.25
AT4G18430.1 Thale cress cytosol 80.09 79.72
CDY01540 Canola cytosol 79.63 79.26
CDY55638 Canola cytosol 79.63 79.26
CDX76522 Canola cytosol 79.17 78.8
Bra012597.1-P Field mustard cytosol 79.17 78.8
Bra021009.1-P Field mustard cytosol 78.7 78.34
TraesCS7B01G273300.1 Wheat plastid 78.7 78.34
KRH27001 Soybean cytosol, endoplasmic reticulum 78.7 77.98
KRH22324 Soybean cytosol, endoplasmic reticulum 77.78 77.06
TraesCS3B01G324300.1 Wheat cytosol, golgi 74.54 72.85
CDY60884 Canola cytosol 74.07 71.75
TraesCS3B01G396200.1 Wheat cytosol, golgi 66.2 66.2
TraesCS5B01G498600.1 Wheat cytosol, plastid 65.28 65.58
TraesCS5B01G530800.1 Wheat cytosol 66.2 64.13
TraesCS1B01G018900.1 Wheat cytosol 66.2 64.13
TraesCS1B01G150900.1 Wheat cytosol 61.11 60.83
TraesCS1B01G152100.1 Wheat cytosol 59.26 59.26
GSMUA_Achr7P10970_001 Banana cytosol 67.59 57.71
TraesCS5B01G171900.1 Wheat cytosol 59.26 56.64
TraesCS7B01G287900.1 Wheat cytosol 53.24 51.34
TraesCS3B01G272300.1 Wheat cytosol 81.48 50.87
TraesCS5B01G316300.1 Wheat cytosol 53.7 46.77
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449
PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF346SMART:SM00173SMART:SM00174SMART:SM00175
SMART:SM00176SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231EnsemblPlantsGene:TraesCS7B01G200600
EnsemblPlants:TraesCS7B01G200600.1TIGR:cd01868::::
Description
No Description!
Coordinates
chr7B:+:364211802..364219407
Molecular Weight (calculated)
24110.5 Da
IEP (calculated)
5.413
GRAVY (calculated)
-0.239
Length
216 amino acids
Sequence
(BLAST)
001: MAYRADDDYD YLFKVVLIGD SGVGKSNLLT RFTRNEFSLE SKSTIGVEFA TRSIRVDDKV VKAQIWDTAG QERYRAITSA YYRGAVGALV VYDVTRHVTF
101: ENVERWLKEL KDHTDANIVI MLVGNKADLR HLRAVSVEDA KAFAEREYTF FMETSALEAM NVEDAFTEVL TQIYRVVSKK ALDIGDDPAA PPRGQTINVG
201: SKDDVSAVKK AGCCSS
Best Arabidopsis Sequence Match ( AT5G60860.1 )
(BLAST)
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Arabidopsis Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.