Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g010790.1.1 | Tomato | cytosol, nucleus, unclear | 89.81 | 89.4 |
| PGSC0003DMT400020208 | Potato | cytosol | 89.81 | 89.4 |
| Solyc07g053480.2.1 | Tomato | cytosol, plastid | 89.35 | 88.94 |
| PGSC0003DMT400024319 | Potato | cytosol | 89.35 | 88.94 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 88.89 | 88.48 |
| KRH25681 | Soybean | cytosol | 87.96 | 87.56 |
| VIT_19s0014g01820.t01 | Wine grape | cytosol | 87.5 | 87.1 |
| KRH55839 | Soybean | endoplasmic reticulum | 87.5 | 87.1 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 87.04 | 87.04 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 87.04 | 87.04 |
| Os09t0327100-01 | Rice | plasma membrane | 86.57 | 86.57 |
| OQU89311 | Sorghum | cytosol | 86.57 | 86.57 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 86.11 | 86.11 |
| Os05t0564400-02 | Rice | plasma membrane | 86.11 | 85.71 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 85.65 | 85.65 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 85.19 | 85.19 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 85.19 | 85.19 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 84.72 | 84.72 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 84.72 | 84.72 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 84.26 | 84.26 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 83.33 | 83.33 |
| EES19950 | Sorghum | cytosol | 83.33 | 83.33 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 83.33 | 82.95 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 82.87 | 82.87 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 82.41 | 82.41 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 82.41 | 82.41 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 72.22 | 82.11 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 81.94 | 81.94 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 81.02 | 81.02 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 72.69 | 78.5 |
| KRH22324 | Soybean | cytosol, endoplasmic reticulum | 78.7 | 77.98 |
| KRH27001 | Soybean | cytosol, endoplasmic reticulum | 78.7 | 77.98 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 75.93 | 75.23 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 75.93 | 75.23 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 66.67 | 75.0 |
| OQU87300 | Sorghum | cytosol | 73.61 | 72.6 |
| Zm00001d043935_P001 | Maize | cytosol | 73.61 | 72.27 |
| VIT_19s0014g01160.t01 | Wine grape | extracellular | 81.02 | 69.44 |
| VIT_12s0035g01140.t01 | Wine grape | extracellular | 68.52 | 68.84 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 68.52 | 68.2 |
| VIT_13s0019g02470.t01 | Wine grape | cytosol | 68.52 | 61.41 |
| VIT_13s0064g01300.t01 | Wine grape | cytosol | 60.19 | 57.52 |
| VIT_08s0007g07800.t01 | Wine grape | cytosol | 58.33 | 56.5 |
| VIT_07s0191g00030.t01 | Wine grape | cytosol | 58.8 | 56.19 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 65.28 | 55.73 |
| VIT_15s0048g03000.t01 | Wine grape | cytosol | 59.26 | 53.56 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 75.93 | 47.4 |
Protein Annotations
| EntrezGene:100252396 | wikigene:100252396 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | UniProt:A5BKD0 | EMBL:AM462529 |
| ProteinID:CAN83336 | ProteinID:CAN83336.1 | ProteinID:CCB47342 | ProteinID:CCB47342.1 | EMBL:FN595235 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0016787 | EntrezGene:LOC100252396 |
| wikigene:LOC100252396 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF842 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGR:TC51834 | TIGR:TC59644 | TIGRFAMs:TIGR00231 | UniParc:UPI00015245B6 |
| ArrayExpress:VIT_12s0028g02650 | EnsemblPlantsGene:VIT_12s0028g02650 | EnsemblPlants:VIT_12s0028g02650.t01 | unigene:Vvi.8791 | RefSeq:XP_002278749 | RefSeq:XP_002278749.1 |
Description
No Description!
Coordinates
chr12:+:3444946..3447633
Molecular Weight (calculated)
23837.0 Da
IEP (calculated)
5.159
GRAVY (calculated)
-0.213
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAYRAEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSIRVDEK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVDRWLKE LRDHTDSSIV IMLVGNKADL GHLRAVSTED AKAYAEKEST FFIETSALES TNVENAFTEV LTQIYHVVSR KALETGDEAA TVPKGQTINV
201: GKDDVSAIKI GGCCSA
101: FENVDRWLKE LRDHTDSSIV IMLVGNKADL GHLRAVSTED AKAYAEKEST FFIETSALES TNVENAFTEV LTQIYHVVSR KALETGDEAA TVPKGQTINV
201: GKDDVSAIKI GGCCSA
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Arabidopsis Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.