CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55839	Soybean	endoplasmic reticulum	99.08	99.08
KRH20359	Soybean	cytosol, endoplasmic reticulum	94.93	94.93
KRH50137	Soybean	cytosol, mitochondrion	93.09	93.09
Solyc07g053480.2.1	Tomato	cytosol, plastid	92.63	92.63
PGSC0003DMT400024319	Potato	cytosol	92.63	92.63
KRH30863	Soybean	cytosol	92.17	92.17
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	91.71	91.71
PGSC0003DMT400020208	Potato	cytosol	90.78	90.78
Os05t0564400-02	Rice	plasma membrane	90.32	90.32
OQU89311	Sorghum	cytosol	89.86	90.28
TraesCS5A01G184100.1	Wheat	golgi, plastid	89.86	90.28
TraesCS5B01G182200.1	Wheat	cytosol	89.86	90.28
Os09t0327100-01	Rice	plasma membrane	89.86	90.28
TraesCS5D01G188900.1	Wheat	cytosol	89.86	90.28
TraesCS7A01G285200.1	Wheat	cytosol	89.86	90.28
TraesCS7D01G289000.1	Wheat	cytosol	89.86	90.28
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	89.86	90.28
Solyc12g010790.1.1	Tomato	cytosol, nucleus, unclear	89.86	89.86
EES19950	Sorghum	cytosol	89.4	89.81
TraesCS7B01G200600.1	Wheat	cytosol	89.4	89.81
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	88.48	88.89
TraesCS1A01G398400.1	Wheat	cytosol	88.48	88.89
TraesCS1D01G405900.1	Wheat	cytosol	88.02	88.43
TraesCS1B01G426300.1	Wheat	cytosol	88.02	88.43
VIT_12s0028g02650.t01	Wine grape	cytosol	87.56	87.96
GSMUA_Achr3P15540_001	Banana	cytosol	87.56	87.96
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	87.1	87.5
GSMUA_Achr8P27180_001	Banana	cytosol	87.1	87.5
GSMUA_Achr5P09130_001	Banana	cytosol	86.64	86.64
GSMUA_Achr1P11940_001	Banana	cytosol	84.33	84.72
GSMUA_Achr4P02760_001	Banana	cytosol	72.35	82.63
KRH27001	Soybean	cytosol, endoplasmic reticulum	82.95	82.57
KRH22324	Soybean	cytosol, endoplasmic reticulum	82.49	82.11
GSMUA_Achr1P04780_001	Banana	cytosol	75.58	82.0
GSMUA_Achr7P14790_001	Banana	cytosol	69.12	78.12
TraesCS3A01G247000.1	Wheat	cytosol	77.42	77.06
TraesCS3D01G244500.1	Wheat	cytosol	77.42	77.06
KRH27364	Soybean	endoplasmic reticulum	76.96	76.96
KRH21946	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	76.04	76.04
OQU87300	Sorghum	cytosol	76.04	75.34
KRH27074	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	75.12	74.77
KRH22259	Soybean	cytosol, nucleus	74.65	74.31
Zm00001d043935_P001	Maize	cytosol	75.12	74.09
KRH24729	Soybean	endoplasmic reticulum, nucleus	68.66	68.98
KRG97821	Soybean	cytosol, endoplasmic reticulum, nucleus	68.66	68.66
KRH29738	Soybean	endoplasmic reticulum	68.2	68.52
KRH26288	Soybean	endoplasmic reticulum	68.2	68.2
KRH06049	Soybean	endoplasmic reticulum	67.28	67.59
KRH15036	Soybean	cytosol, nucleus	66.36	66.67
KRH73103	Soybean	cytosol, endoplasmic reticulum, nucleus	65.9	65.9
KRH71891	Soybean	cytosol	61.29	59.64
KRH33003	Soybean	cytosol	60.83	58.67
GSMUA_Achr7P10970_001	Banana	cytosol	67.74	58.1
KRG88929	Soybean	cytosol	58.53	56.95
KRH75359	Soybean	endoplasmic reticulum	58.53	56.95
KRH31313	Soybean	endoplasmic reticulum	57.14	55.61
KRH59301	Soybean	cytosol, endoplasmic reticulum	58.53	55.46
KRH36458	Soybean	cytosol	57.6	54.82
KRH27503	Soybean	cytosol	57.14	54.39
KRG97554	Soybean	cytosol, endoplasmic reticulum	55.3	53.81
KRH43151	Soybean	cytosol, endoplasmic reticulum	57.6	52.74
KRH68938	Soybean	cytosol	55.3	50.85
KRG97215	Soybean	cytosol	55.3	50.85
KRH06418	Soybean	cytosol	56.68	50.41
KRH47850	Soybean	cytosol	56.22	49.8
TraesCS3B01G272300.1	Wheat	cytosol	77.42	48.55

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EMBL:ACUP02007315	EnsemblPlantsGene:GLYMA_12G120400	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0016787	UniProt:I1LS95	EnsemblPlants:KRH25681
ProteinID:KRH25681	ProteinID:KRH25681.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0001EE997F	:

Description

hypothetical protein

Coordinates

chr12:-:12830269..12833588

Molecular Weight (calculated)

24172.5 Da

IEP (calculated)

5.728

GRAVY (calculated)

-0.260

Length

217 amino acids

Sequence
(BLAST)

001: MGAYRADDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAVSTDD AKAFAERENT FFMETSALES LNVDNAFTEV LTQIYRVVSR KTLEIGDDPA ALPKGQTINV
201: GSRDDVSAVK KSGCCSA

Best Arabidopsis Sequence Match ( AT5G60860.1 )
(BLAST)

001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN

Arabidopsis Description

RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.