Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75359 | Soybean | endoplasmic reticulum | 96.41 | 96.41 |
| KRH33003 | Soybean | cytosol | 85.2 | 84.44 |
| KRH71891 | Soybean | cytosol | 81.61 | 81.61 |
| VIT_08s0007g07800.t01 | Wine grape | cytosol | 79.82 | 79.82 |
| PGSC0003DMT400033664 | Potato | cytosol | 79.82 | 79.46 |
| Solyc10g079030.1.1 | Tomato | plastid | 80.27 | 79.2 |
| PGSC0003DMT400021064 | Potato | cytosol | 78.92 | 77.88 |
| Solyc03g064020.2.1 | Tomato | cytosol | 78.03 | 77.68 |
| KRG97554 | Soybean | cytosol, endoplasmic reticulum | 70.4 | 70.4 |
| KRH31313 | Soybean | endoplasmic reticulum | 69.51 | 69.51 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 70.85 | 69.0 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 69.51 | 65.4 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 57.85 | 59.72 |
| KRH50137 | Soybean | cytosol, mitochondrion | 57.85 | 59.45 |
| KRH29738 | Soybean | endoplasmic reticulum | 57.4 | 59.26 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 57.4 | 58.99 |
| KRH15036 | Soybean | cytosol, nucleus | 56.95 | 58.8 |
| KRG97821 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.95 | 58.53 |
| KRH26288 | Soybean | endoplasmic reticulum | 56.95 | 58.53 |
| KRH25681 | Soybean | cytosol | 56.95 | 58.53 |
| KRH55839 | Soybean | endoplasmic reticulum | 56.95 | 58.53 |
| KRH27364 | Soybean | endoplasmic reticulum | 56.5 | 58.06 |
| KRH30863 | Soybean | cytosol | 56.5 | 58.06 |
| KRH73103 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.5 | 58.06 |
| KRH06049 | Soybean | endoplasmic reticulum | 56.05 | 57.87 |
| KRH27074 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 56.5 | 57.8 |
| KRH22259 | Soybean | cytosol, nucleus | 56.5 | 57.8 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 56.05 | 57.6 |
| KRH68938 | Soybean | cytosol | 60.54 | 57.2 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 55.61 | 57.14 |
| KRG97215 | Soybean | cytosol | 60.09 | 56.78 |
| KRH06418 | Soybean | cytosol | 61.88 | 56.56 |
| KRH47850 | Soybean | cytosol | 61.44 | 55.92 |
| KRH22324 | Soybean | cytosol, endoplasmic reticulum | 53.36 | 54.59 |
| KRH27001 | Soybean | cytosol, endoplasmic reticulum | 52.91 | 54.13 |
| KRH27503 | Soybean | cytosol | 54.71 | 53.51 |
| KRH36458 | Soybean | cytosol | 54.26 | 53.07 |
Protein Annotations
| EntrezGene:100794271 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EnsemblPlantsGene:GLYMA_U014000 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 | UniProt:I1LKI4 |
| EnsemblPlants:KRG88929 | ProteinID:KRG88929 | ProteinID:KRG88929.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI000233CB77 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:+:1385042..1388965
Molecular Weight (calculated)
24934.0 Da
IEP (calculated)
6.277
GRAVY (calculated)
-0.163
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SLDSKATIGV EFQTKTLIID NKIIKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMVKWL EELRGHADQN IVIMLIGNKC DLGSLRAVPM EDAEELAQRE NLFFMETSAL ESTNVETCFL TILTEIYRIH AKKSLTTSDD DIGGSGLLKG
201: SRIIVPNQEI YNGGKKGGCC FAS
101: QSFDHMVKWL EELRGHADQN IVIMLIGNKC DLGSLRAVPM EDAEELAQRE NLFFMETSAL ESTNVETCFL TILTEIYRIH AKKSLTTSDD DIGGSGLLKG
201: SRIIVPNQEI YNGGKKGGCC FAS
001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
Arabidopsis Description
RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.