CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36458	Soybean	cytosol	97.37	97.37
KRH59301	Soybean	cytosol, endoplasmic reticulum	58.33	58.08
KRH50137	Soybean	cytosol, mitochondrion	54.82	57.6
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	54.82	57.6
KRH20359	Soybean	cytosol, endoplasmic reticulum	54.82	57.6
KRH25681	Soybean	cytosol	54.39	57.14
KRH30863	Soybean	cytosol	54.39	57.14
KRH55839	Soybean	endoplasmic reticulum	54.39	57.14
KRH15036	Soybean	cytosol, nucleus	53.95	56.94
KRH24729	Soybean	endoplasmic reticulum, nucleus	53.95	56.94
KRH29738	Soybean	endoplasmic reticulum	53.95	56.94
KRH33003	Soybean	cytosol	56.14	56.89
KRH27364	Soybean	endoplasmic reticulum	53.95	56.68
KRH21946	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	53.95	56.68
KRH71891	Soybean	cytosol	55.26	56.5
KRH31313	Soybean	endoplasmic reticulum	55.26	56.5
KRG97554	Soybean	cytosol, endoplasmic reticulum	55.26	56.5
KRH73103	Soybean	cytosol, endoplasmic reticulum, nucleus	53.51	56.22
KRG97821	Soybean	cytosol, endoplasmic reticulum, nucleus	53.07	55.76
KRH27001	Soybean	cytosol, endoplasmic reticulum	53.07	55.5
KRH26288	Soybean	endoplasmic reticulum	52.63	55.3
KRH43151	Soybean	cytosol, endoplasmic reticulum	57.02	54.85
KRG88929	Soybean	cytosol	53.51	54.71
KRH22324	Soybean	cytosol, endoplasmic reticulum	52.19	54.59
KRH75359	Soybean	endoplasmic reticulum	53.07	54.26
KRH06049	Soybean	endoplasmic reticulum	51.32	54.17
KRH27074	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	51.32	53.67
KRH22259	Soybean	cytosol, nucleus	51.32	53.67
KRH47850	Soybean	cytosol	56.14	52.24
KRH06418	Soybean	cytosol	55.7	52.05
KRH68938	Soybean	cytosol	53.07	51.27
KRG97215	Soybean	cytosol	52.63	50.85

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EMBL:ACUP02007812	EnsemblPlantsGene:GLYMA_12G238800	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	UniProt:I1LVF0
EnsemblPlants:KRH27503	ProteinID:KRH27503	ProteinID:KRH27503.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF857	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000233CEAB

Description

hypothetical protein

Coordinates

chr12:+:39791618..39793975

Molecular Weight (calculated)

25794.8 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.318

Length

228 amino acids

Sequence
(BLAST)

001: MAQWQGNADE GIDYMFKIVM TGDSGVGKSQ LLNRFVKNEF HMKSKPTIGV EFLTRTVVMD HKLVKAQIWD TAGQERYQAI TTAYYRGATG ALLAYDITKQ
101: QTFDHVEKWL DELRIHADKN ILVMLVGNKS DLSSLRAVPT EVARDFAQQE GLFFLETSAL DSSNVESAFI GLLSQVYRTV SRKHILVDGH ESNWDKVNLE
201: LEGTKIKVPS QEPECQNAKK RFNCCSIL

Best Arabidopsis Sequence Match ( AT3G12160.1 )
(BLAST)

001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS

Arabidopsis Description

RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.