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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH05675
KRH28917
KRH76543

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60860.1 KRH05675 AT3G06540.1 21798944
AT5G60860.1 KRH28917 AT3G06540.1 21798944
AT5G60860.1 KRH76543 AT3G06540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH20359 Soybean cytosol, endoplasmic reticulum 97.7 97.7
KRH30863 Soybean cytosol 93.55 93.55
KRH32712 Soybean cytosol, endoplasmic reticulum, mitochondrion 93.55 93.55
KRH25681 Soybean cytosol 93.09 93.09
VIT_10s0003g00550.t01 Wine grape cytosol 92.63 92.63
KRH55839 Soybean endoplasmic reticulum 92.63 92.63
AT5G60860.1 Thale cress cytosol 91.71 91.71
OQU89311 Sorghum cytosol 90.32 90.74
Os09t0327100-01 Rice plasma membrane 90.32 90.74
Os05t0564400-02 Rice plasma membrane 90.32 90.32
TraesCS5A01G184100.1 Wheat golgi, plastid 89.86 90.28
TraesCS7A01G285200.1 Wheat cytosol 89.86 90.28
TraesCS7D01G289000.1 Wheat cytosol 89.86 90.28
HORVU5Hr1G056470.1 Barley cytosol, plasma membrane 89.86 90.28
TraesCS7B01G200600.1 Wheat cytosol 89.4 89.81
TraesCS5B01G182200.1 Wheat cytosol 88.94 89.35
TraesCS5D01G188900.1 Wheat cytosol 88.94 89.35
Bra001581.1-P Field mustard cytosol 89.4 88.99
Zm00001d009572_P001 Maize cytosol, mitochondrion, plasma membrane 88.48 88.89
EES19950 Sorghum cytosol 88.48 88.89
CDY30818 Canola cytosol 88.94 88.53
CDY34094 Canola cytosol 88.94 88.53
CDX82451 Canola cytosol 88.94 88.53
Bra032914.1-P Field mustard cytosol 88.94 88.53
AT3G15060.1 Thale cress cytosol 88.48 88.48
GSMUA_Achr1P11940_001 Banana cytosol 88.02 88.43
Bra010860.1-P Field mustard cytosol 87.56 88.37
CDX90160 Canola cytosol 87.56 88.37
CDY35757 Canola cytosol 88.48 88.07
TraesCS1A01G398400.1 Wheat cytosol 87.56 87.96
CDX75804 Canola cytosol 88.02 87.61
CDX94631 Canola cytosol 88.02 87.61
Bra030105.1-P Field mustard cytosol 88.02 87.61
GSMUA_Achr3P15540_001 Banana cytosol 87.1 87.5
TraesCS1D01G405900.1 Wheat cytosol 87.1 87.5
TraesCS1B01G426300.1 Wheat cytosol 87.1 87.5
CDX79548 Canola cytosol 79.26 87.31
CDY15659 Canola cytosol 87.56 87.16
Zm00001d039016_P001 Maize cytosol, mitochondrion, plasma membrane 86.64 87.04
AT1G28550.1 Thale cress cytosol 87.1 86.7
AT2G33870.1 Thale cress cytosol 87.1 86.7
GSMUA_Achr5P09130_001 Banana cytosol 86.64 86.64
GSMUA_Achr8P27180_001 Banana cytosol 85.71 86.11
PGSC0003DMT400033395 Potato cytosol 85.71 86.11
PGSC0003DMT400058784 Potato cytosol 85.25 86.05
CDY20100 Canola cytosol 86.18 85.78
Bra021589.1-P Field mustard cytosol 86.18 85.78
Solyc03g006270.2.1 Tomato cytosol 85.25 85.65
Bra022959.1-P Field mustard cytosol 85.71 85.32
Solyc10g008840.2.1 Tomato cytosol 84.33 85.12
KRH27001 Soybean cytosol, endoplasmic reticulum 83.87 83.49
KRH22324 Soybean cytosol, endoplasmic reticulum 83.87 83.49
GSMUA_Achr4P02760_001 Banana cytosol 72.81 83.16
GSMUA_Achr7P14790_001 Banana cytosol 72.35 81.77
CDY55638 Canola cytosol 81.57 81.57
AT4G18430.1 Thale cress cytosol 81.57 81.57
CDY01540 Canola cytosol 81.57 81.57
Bra012597.1-P Field mustard cytosol 81.11 81.11
GSMUA_Achr1P04780_001 Banana cytosol 74.65 81.0
CDX76522 Canola cytosol 80.65 80.65
Bra021009.1-P Field mustard cytosol 80.18 80.18
KRH21946 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 78.8 78.8
TraesCS3A01G247000.1 Wheat cytosol 78.8 78.44
TraesCS3D01G244500.1 Wheat cytosol 78.8 78.44
KRH27364 Soybean endoplasmic reticulum 78.34 78.34
KRH22259 Soybean cytosol, nucleus 77.42 77.06
KRH27074 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 76.96 76.61
OQU87300 Sorghum cytosol 76.04 75.34
Zm00001d043935_P001 Maize cytosol 76.04 75.0
CDY60884 Canola cytosol 74.19 72.2
KRG97821 Soybean cytosol, endoplasmic reticulum, nucleus 70.05 70.05
KRH15036 Soybean cytosol, nucleus 69.12 69.44
KRH24729 Soybean endoplasmic reticulum, nucleus 69.12 69.44
KRH29738 Soybean endoplasmic reticulum 68.66 68.98
KRH26288 Soybean endoplasmic reticulum 68.66 68.66
KRH06049 Soybean endoplasmic reticulum 67.74 68.06
KRH73103 Soybean cytosol, endoplasmic reticulum, nucleus 67.74 67.74
KRH71891 Soybean cytosol 62.21 60.54
KRH33003 Soybean cytosol 61.75 59.56
GSMUA_Achr7P10970_001 Banana cytosol 69.12 59.29
KRH75359 Soybean endoplasmic reticulum 59.91 58.3
KRG88929 Soybean cytosol 59.45 57.85
KRH31313 Soybean endoplasmic reticulum 58.99 57.4
KRH59301 Soybean cytosol, endoplasmic reticulum 60.37 57.21
KRG97554 Soybean cytosol, endoplasmic reticulum 57.14 55.61
KRH27503 Soybean cytosol 57.6 54.82
KRH36458 Soybean cytosol 57.6 54.82
KRH43151 Soybean cytosol, endoplasmic reticulum 59.45 54.43
KRH06418 Soybean cytosol 58.53 52.05
KRH47850 Soybean cytosol 58.06 51.43
KRH68938 Soybean cytosol 54.84 50.42
KRG97215 Soybean cytosol 54.84 50.42
TraesCS3B01G272300.1 Wheat cytosol 78.8 49.42
Protein Annotations
EntrezGene:100527366MapMan:22.8.1.1Gene3D:3.40.50.300UniProt:A0A0R0JBP2EMBL:ACUP02004664EnsemblPlantsGene:GLYMA_07G202900
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlants:KRH50137ProteinID:KRH50137ProteinID:KRH50137.1InterPro:P-loop_NTPasePFAM:PF00071
PRINTS:PR00449PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF649SMART:SM00173SMART:SM00174
SMART:SM00175SMART:SM00176SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231
UniParc:UPI00019AA8FESEG:seg::::
Description
hypothetical protein
Coordinates
chr7:-:37200169..37204854
Molecular Weight (calculated)
24131.4 Da
IEP (calculated)
5.387
GRAVY (calculated)
-0.235
Length
217 amino acids
Sequence
(BLAST)
001: MAAYKADDDY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIRVDDK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV VMLVGNKADL RHLRAVSTED ATTFAERENT FFMETSALES LNVENAFTEV LTQIYHVVSK KALEVGDDPA ALPKGQTINI
201: GSRDDVSAVK KSGCCSA
Best Arabidopsis Sequence Match ( AT5G60860.1 )
(BLAST)
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Arabidopsis Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.